Salmo salar (Atlantic salmon): 100270809
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Entry
100270809 CDS
T04363
Symbol
nr1h3, lxr
Name
(RefSeq) nuclear receptor subfamily 1 group H member 3
KO
K08536
liver X receptor alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03320
PPAR signaling pathway
sasa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100270809 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100270809 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100270809 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
100270809 (nr1h3)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100270809 (nr1h3)
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
100270809 (nr1h3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
100270809
NCBI-ProteinID:
NP_001138893
UniProt:
B8Y3M0
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Position
ssa26:8673140..8697083
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AA seq
462 aa
AA seq
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MSTLSATDITDVGPGEVFDGAPELQLDCLCSGDDRSSAEMKHEGNLLPLEPPDHAGFSSP
PQKGPSSLAEKSSPLPMEPSDIKADPADSMPANTEGQPVKRKKGPAPKMLGNEVCSVCGD
KASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGM
LEQCVLSEEQIRVKKMKKNEEETARTSAVVTPTPVPEVVPLAPEQLEMIEKLVAMQKQCN
KRSFIDRPKVTPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTRED
QIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFSKG
MNDLHLDEAEYALLIAINIFSADRPNVQDHELVERLQQPYVDALRSYIMIKRPNDHLMFP
RMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgcgactgatatcacagatgttggtcctggtgaggtgtttgacggg
gccccagagctgcagctggactgcctctgcagtggtgacgaccgcagcagtgcagaaatg
aagcatgagggcaacctcctccccctggaaccacccgaccatgcagggttttccagcccc
ccccagaaagggccttcctcactagctgagaagagcagcccactgcccatggagcccagt
gacatcaaggccgaccccgccgacagcatgcctgccaacacagagggccagccggtgaag
aggaagaagggtccagcccccaagatgctggggaacgaggtgtgcagcgtgtgcggggac
aaggcctcaggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttccgc
cgcagtgtcatcaagagtgcccagtattcgtgcaagaacaacggccgctgtgagatggac
atgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgtgaagcgggcatg
ctggagcaatgcgttctctcagaggagcagatccgagtgaaaaagatgaagaagaacgaa
gaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccggaagtggtcccg
ctggcgcccgagcagttggagatgatcgagaagctggtggccatgcagaagcagtgcaac
aagcgctcgttcatcgaccggcccaaagtcacgccgtggccccagagtcaggacccccag
aacagggaggtgcggcagcagcgctttgcccacttcactgagctggccatcatgtcggtc
caggagatagtggactttgccaagcagttgcctggcttcctagagctcaccagagaggac
cagattgccctgctgaagacctcaaccattgagatcatgctgctggagacatcgcggaga
tacaaccctgccattgagagcatcacgttcctgaaggacttcagttataacaaggaggat
tttgccaaagcagggctgcagttggagtttatcaaccccatctttgagttctccaagggg
atgaacgacctgcacctggacgaggcggagtatgctttgctcatcgccattaacatcttc
tctgcagaccggcccaatgtgcaggaccatgaactggtggagcgactgcagcagccgtac
gtggacgcacttcgttcttacatcatgataaagagaccaaatgatcacctgatgtttcca
cgcatgctcatgaagctggtcagcctccgcaccctcagcagcgtccactctgagcaggtc
ttcgccctgcgcctccaggacaagaagctcccgccgctgctatctgaaatctgggacgtc
cacgagtga
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