KEGG   Salmo salar (Atlantic salmon): 100306754
Entry
100306754         CDS       T04363                                 
Symbol
cxcr4
Name
(RefSeq) C-X-C chemokine receptor type 4
  KO
K04189  C-X-C chemokine receptor type 4
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03250  Viral life cycle - HIV-1
sasa03260  Virion - Human immunodeficiency virus
sasa04020  Calcium signaling pathway
sasa04060  Cytokine-cytokine receptor interaction
sasa04144  Endocytosis
sasa04672  Intestinal immune network for IgA production
sasa04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100306754 (cxcr4)
   03260 Virion - Human immunodeficiency virus
    100306754 (cxcr4)
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    100306754 (cxcr4)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100306754 (cxcr4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100306754 (cxcr4)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100306754 (cxcr4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100306754 (cxcr4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:sasa04030]
    100306754 (cxcr4)
   04050 Cytokine receptors [BR:sasa04050]
    100306754 (cxcr4)
   04090 CD molecules [BR:sasa04090]
    100306754 (cxcr4)
G protein-coupled receptors [BR:sasa04030]
 Rhodopsin family
  Chemokine
   CXC Chemokine
    100306754 (cxcr4)
Cytokine receptors [BR:sasa04050]
 Chemokine receptors
  CXC Chemokine
   100306754 (cxcr4)
CD molecules [BR:sasa04090]
 Proteins
  100306754 (cxcr4)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx
Other DBs
NCBI-GeneID: 100306754
NCBI-ProteinID: NP_001158765
UniProt: C0H8I6
LinkDB
Position
ssa25:10347591..10349559
AA seq 362 aa
MSSFYEVEHIFLDNTSYEESGDFDLDLGFEEPCNRVGGDYFQRIFLPTVYGIIFLLGIVG
NGLVVTVMGYQKKVKTMTDKYRLHLSVADLLLVFTLPFWAVDAASSWYFGGFLCTTVHVI
YTINLYSSVLILAFISVDRYLAVVHATNSQTTRKRKLLADRWIYVAVWLPAAVLTVPDIV
FATALDSGSRTICQRIYPQKTSFYWMAAFRFQHILVGFVLPGLVILTCYCIIIAKLSQGA
KGQVLKRKALKTTVILILCFFSCWLPYCVGIFVDTLMLLNVISHNCALEQSLQTWILITE
ALAYFHCCLNPILYAFLGVKFKKSARNALTVSSRSSHKVLTKKRGPISSVSTESESSSVL
YS
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtcttctttttacgaggtcgaacacatatttttggacaacaccagctatgaagaatca
ggggattttgacttggatttgggtttcgaggagccgtgcaacagagtcggaggtgattat
tttcaaaggatcttcttaccgacagtttatggaataatctttctacttggaatcgtcgga
aatggactggtagtaacagtgatgggctaccagaaaaaggtcaaaacgatgactgataaa
tacaggctccatctttctgtggctgacctcctactcgtcttcacgctacctttctgggcg
gtggatgcggcaagcagttggtactttggtggcttcctctgtaccactgtgcatgtgatc
tacaccatcaacctgtatagcagtgtactgattctggctttcatcagcgtggacaggtac
ctggcagtggtgcatgccaccaacagccaaaccaccaggaagaggaagctgcttgcagac
agatggatctatgtggcggtatggctacctgctgctgttctcactgtgccagacatagtg
tttgccacagctctggatagcggctccagaaccatctgccagcgcatatacccccagaag
actagcttctactggatggctgctttccgtttccagcacattctggtgggctttgtcctg
cctggtttggtcatcctcacctgctactgcatcatcattgccaagctgtcccagggtgcc
aagggtcaagtgttgaagaggaaggctctcaagaccaccgtaatcctcatcctgtgcttc
ttcagctgctggctgccgtactgtgtgggaatctttgtggacaccctaatgttgctcaat
gtgatctcccataactgtgccctggagcagagtctgcagacctggatcttaatcacagag
gctctggcatactttcattgctgtctcaaccccatcctttatgctttcctgggtgttaag
ttcaagaaatctgcccgaaatgcactgaccgtcagcagtaggtcaagtcataaagtactg
actaaaaaaagaggacccatttcatctgtatccactgaatctgagtcttcaagtgtcttg
tacagttaa

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