Salmo salar (Atlantic salmon): 100306779
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Entry
100306779 CDS
T04363
Symbol
ext1c
Name
(RefSeq) exostoses (multiple) 1c
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sasa01100
Metabolic pathways
Module
sasa_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
100306779 (ext1c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
100306779 (ext1c)
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
100306779 (ext1c)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
100306779 (ext1c)
Glycosyltransferases [BR:
sasa01003
]
Glycan extension
O-Glycan
100306779 (ext1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
100306779
NCBI-ProteinID:
NP_001158790
UniProt:
C0H8V7
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Position
ssa14:55848133..55949529
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AA seq
759 aa
AA seq
DB search
MQARKKYVLLGLCACCWLLLFYWGGGVQVRLLKLLGQQRGDVVRPWPDWTDRVLLPGYAQ
LEELQTGPGSAESPRQRHQAWTGIYKDSRCRMETCFDFTRCRRRGRDGFRVYVYPSEKGE
RGSESYRKILTSIGESRYYTTDPREACLFVLGIDTLDRDQLSGQFVPNLDDRIKGYPLWN
EGQNHLIFNLYSGTWPNYTEDLGFNIGQAILAKASLNTEHFRPGFDVSIPLFSKDHPQKG
GERGWLVRNTVPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHGKDWE
KHKDARCDHDNLEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACVPVLLSNGWE
LPFSDVIQWNQAVIEGDERLLLQVPSTVHAVGNERVLALRQRTQMLWDAYFSSVDKIVLT
TLEIIKDRVFSHVSRNKYMWNALPGGLLVLPEYSTHLAHFPFYYLSLGVSPGQEFTAIIH
AVSPLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKPPPHRSKWPPMPVPLTVTDGRRKT
SSRFLPNVAIETEAVLSLDEDTVLLTSEVNFAFMVWMSFPERIVGYPPRSHFWDPVKNAW
GYTSKWTNEYSIVLTGAAFYHRYYHYLFSHYLPPSLRALVDRTSNCEDILMNFLVSAVTH
LPPIKVAQRKQYKELPSPQVRPHPSTVNLTNELPSPQGTKMSAPWANPEHFTQRQECVNS
FASWFGYMPLVHSQFRLDPLLFKDQVSVLRKKYKDLEHA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgtaagaagtatgtcctgctggggctgtgtgcttgctgctggctgctgctc
ttctactggggcggtggggtccaggtccgtctcctcaagctgctggggcagcagaggggc
gatgtggtgcgcccctggcccgactggaccgacagggtcctcctgccgggctatgcccag
ctggaggaactccagacagggcctggttctgccgagtccccccgtcagcgtcaccaagcc
tggacgggcatctataaagacagtcgctgccgaatggagacctgcttcgactttacgaga
tgtcgacgtagagggcgggatgggtttagagtgtacgtttacccatcggagaagggtgag
cgcgggtcggagagctatcgtaagatactgacgtctataggcgagtcacggtactacacc
acagaccctcgcgaggcatgtctcttcgttttggggattgacactctggaccgcgaccag
ctctcggggcagtttgtgcccaacttggacgatcgtatcaagggttacccgctctggaac
gagggacagaaccaccttatctttaacctgtactcgggcacctggcccaactacaccgag
gacctgggcttcaacatcggtcaggccatcctggctaaagccagcctcaacacggaacac
ttccggcctgggttcgacgtctccatccccctcttctccaaggaccacccccagaagggg
ggcgagaggggctggttggtgcgaaacacggtgccaccgcgcaggaagtacctgttgatg
ttcaaagggaagcggtatctaacgggcatcggctcggacacccgtaacgccctgcatcat
atccataacgggaaggacatagtgtccctcaccacatgccgtcacgggaaggactgggag
aaacacaaagacgcccgctgtgaccatgacaacctagagtatgagaggtttgattaccag
gagctgctccacaactccaccttctgcctggttccccggggtcgtcgcctgggctccttt
cgcttcctagagtctttacaggcggcgtgtgttccagtgttgctcagtaatggttgggag
ctgcccttctctgatgtcatccagtggaaccaggctgtcatagaaggagatgagagattg
ctactgcaggtcccgtctacagtgcatgcggtgggaaatgagcgagtcctagctctgagg
cagcggacccagatgctatgggatgcctacttctcctccgtggacaagatagtcctcacc
acactggagataattaaggaccgggttttctctcacgtctccagaaataagtacatgtgg
aacgccctgccagggggcctactggtcctgccagagtactccactcacctggcccacttc
cccttctattacctgagcctaggggtcagtccaggtcaagagttcaccgccatcatccat
gccgtctccccattggtctcccagtctcagccaatcatgaagctgcttcaggtggtctcc
aagtccaaatactgttcacagatcatcatcctgtggaacagtgagaaaccaccgccccac
aggagtaaatggccccccatgcctgtccccctcactgtgacagatggtaggaggaagacg
agcagtcgtttcctgcccaacgtggccatagagacagaggcagtgctgagtctggatgaa
gatacagtcctgctgaccagtgaggtgaactttgccttcatggtgtggatgagttttcct
gagcgcatcgtgggctacccccccaggagtcacttctgggacccagtgaagaatgcgtgg
gggtacacctccaagtggactaacgagtactccatcgttctgacaggagcagccttctac
cacaggtactatcactacctgttctcccactacctgcccccttccctgcgggcgctggtg
gaccgcacctccaactgtgaggacatcctcatgaacttcctggtttccgccgtcacccac
ctgccgccaatcaaagtggcccagaggaaacagtacaaggagcttcccagcccacaggtg
aggccacacccatcaacggtgaatctgaccaatgagctgcccagcccacagggtacaaag
atgagtgctccatgggccaacccagagcactttacccagaggcaagagtgtgtgaacagc
ttcgccagctggttcggctacatgcccctggtccactcccagttccgtctggaccccctg
ctcttcaaggaccaggtgtctgtcctacgcaagaagtacaaggacctggaacatgcctga
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