Salmo salar (Atlantic salmon): 100380601
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Entry
100380601 CDS
T04363
Symbol
tmem5
Name
(RefSeq) transmembrane protein 5
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00515
Mannose type O-glycan biosynthesis
sasa01100
Metabolic pathways
Module
sasa_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
100380601 (tmem5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
100380601 (tmem5)
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
100380601 (tmem5)
Glycosyltransferases [BR:
sasa01003
]
Glycan extension
O-Glycan
100380601 (tmem5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RXYLT1_N
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
100380601
NCBI-ProteinID:
NP_001167357
UniProt:
C0HBP0
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All DBs
Position
ssa16:complement(15213063..15216884)
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AA seq
336 aa
AA seq
DB search
MKKHHRKIFILIVFVYVVFSLYAAYNVFFNTKVITRVHRVVKKITVATSGGGVVAPNIGD
DVWNPWEDEQANALSALHKQREAFRQYQERIDKNRPKRYKVQIWGKAAIGLYLWEHILEG
PLNPTDIQAQWREGEIQVGKIDFSFYTGPAVIQGHVPLDTDSVVLVLNGREQQKISYATR
WLQHVQTLMQFHAVNRVAVVLLGSERCTNDWISPYLRRHGGFVDLLFLVYDSPWVNDKDV
FQWPLGVATYRQFPVVMPNSHMVSSARPFLCNFLGTVYKNSSRETLMGILKQTGLDKECI
TTGREKYFTMLCCHCQALYQFTIMVFSPIFASCLSQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatcacagaaaaatattcatcctgatagtttttgtctatgtggtgttttcc
ttgtatgctgcatacaatgtattttttaatacgaaggtgatcacccgtgtccacagagtg
gtgaagaaaattacagtcgcaacctcaggtggtggtgttgtggctcctaacattggggat
gatgtgtggaacccttgggaggatgagcaggctaatgcgctttctgctctgcacaaacag
agggaggctttcagacaataccaggagcgcattgacaagaacaggcccaagagatacaaa
gttcaaatctgggggaaagcggccataggactttacctttgggaacatattttagaaggt
cccctcaaccccaccgacatacaagcacagtggagagagggggagatacaggtgggaaag
atagatttcagtttctacacaggtccagcggtgatccaaggccacgttcctctggacaca
gacagtgtggttctggtgctgaacggccgggagcagcagaagatctcctacgccacccgg
tggctgcagcatgtccagaccttgatgcagttccacgctgtgaatcgtgtggctgtggtt
ctgctgggcagcgagcgctgcaccaacgactggatcagcccctacctgaggaggcacggg
ggctttgtggacctgctcttcctggtctatgacagcccctgggttaacgacaaggatgtc
ttccagtggcccctcggagtagccacatacaggcagtttcctgtggtcatgccaaactcc
catatggtgagctccgcaaggcccttcctctgtaacttcctgggaactgtctacaagaac
tcctcgagggaaacactcatggggatcttgaaacaaacaggactggacaaagagtgcatc
actactggcagagagaagtatttcactatgctatgttgtcactgtcaagcactgtatcaa
ttcacaataatggttttcagtccaatttttgcatcctgtctttctcaatga
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