Salmo salar (Atlantic salmon): 106561087
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Entry
106561087 CDS
T04363
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106561087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106561087
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
106561087
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106561087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
106561087
NCBI-ProteinID:
XP_013980185
UniProt:
A0A1S3KNL8
LinkDB
All DBs
Position
ssa10:66180090..66189658
Genome browser
AA seq
467 aa
AA seq
DB search
MEEKQYTSLTVPTDYLQQCFVSSRDNSQEKQKKIVSPQSASCPVVFSTCRYQSTQQHPQA
QHVMQYHNTGHMGHYMEGSREDRVMTELSVHQELPVHQELDFHHDFLGHQEPIVQHHQPV
DTSQAPMPGKRKRGRPPKQKPGEGQPQEEHDQAEALKKAKRTLNRFNGMSVDEVMAKTLP
DIIDHNLDILIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTDEQLNHMHDQNLPEKY
GIGFTNMVERTTPGSKDLSSKEFREGGHQLVEKLKKYKPLIAAFNGKCIYEIFSKEIFGV
KAKKLEFGLQPYTIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDKIKGVAPV
AREVQETEYHFDLGLAKEDAKRMAIKEEQVDPEYENCGGARQDAKQSTSYCNISSTKETA
MPSKDQATAMSHMPYDQWMTQSFADQIPDISCNSSNVPQPQLGAETF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagcagtatacgtcactgacggttcctacggattatctccaacagtgtttc
gtctcatctcgggacaactcccaagaaaaacaaaagaagatagtgtcaccccagtctgcc
tcttgtcctgttgtcttctcgacctgtaggtatcagtccacccagcagcacccccaagct
caacatgtgatgcagtaccataacacaggtcatatgggccattacatggagggatccaga
gaggaccgggtcatgacagagctgtcggtccaccaggagctcccagtccaccaagagctg
gacttccatcatgacttcctcggccatcaagagccaattgtccaacatcatcagcctgtg
gatacatcacaagctccaatgccagggaagagaaagagaggtaggcctcccaaacagaag
cctggggagggccaaccgcaggaggaacacgatcaggcagaagctctgaagaaagccaaa
aggacccttaaccgcttcaatggcatgtcggtggatgaggtcatggccaaaaccctgcca
gacattattgaccacaaccttgacattttgataattggtatcaatccaggactattgtca
gcctacaagggacgacattacccaaacccaggaaatcatttttggaaatgcctgttcctc
tctggtctcactgatgagcaactcaaccacatgcatgatcaaaacctaccggagaagtat
ggcattggctttaccaacatggtggagaggacaacgccaggaagcaaagatctctcaagc
aaagagtttcgtgaaggaggccatcaattggtggagaagctgaagaaatacaagccacta
attgcagctttcaatggaaaatgtatttacgaaattttcagcaaagagatctttggcgtg
aaggcaaagaaactcgagttcggcttacagccgtacacaatcccagaaaccgaaacggtg
tgctacttgatgccctcgtcaagcccccgctgtgcccagttcccccgcgctcaggacaag
gttcacttctacatcaagctgaaggagctacgggataagatcaagggtgtggccccagtt
gcccgtgaggtgcaagagacagagtaccacttcgacttgggacttgccaaagaggacgct
aagaggatggccatcaaggaagagcaggtggatcctgagtacgagaactgcggtggggcg
cgccaggatgcaaagcaaagcaccagctactgcaacatttcctccaccaaagagacagca
atgcccagtaaggaccaagctacagcaatgagccacatgccatacgaccagtggatgaca
cagtcgtttgcggaccagataccggacattagctgtaacagtagcaatgtacctcaacct
cagttgggagcagaaaccttttga
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