Salmo salar (Atlantic salmon): 106561932
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Entry
106561932 CDS
T04363
Name
(RefSeq) oxysterols receptor LXR-alpha-like
KO
K08536
liver X receptor alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03320
PPAR signaling pathway
sasa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106561932
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
106561932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106561932
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106561932
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106561932
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
106561932
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106561932
NCBI-ProteinID:
XP_013981817
UniProt:
A0A1S3KT52
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Position
ssa11:8588464..8627339
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AA seq
469 aa
AA seq
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MSTLSGTDITDVGHGEVFDGAPELQLDCLCSGDDHSSAEMKHEGNLLPLEPPRHAGFSSP
PQKGPSSLAEKNSPLLMEPSNIKADPAGDMPANTEGQPVKRKKGPAPKMLGNEVCSVCGD
KASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGM
LEQCVLSEEQIRVKKMKKNEEETARTSTVVTPTPVPEVVPLAPEQLEMIEKLVAMQKQCN
KRSFIDRPKVTVIPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTR
EDQIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFS
KGMNDLHLDEAEYALLIAINIFSAGQRSSDRPNVQDHELVERLQQPYVDALRSYIMIKRP
NDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccacactgtctgggactgatatcacagatgttggccatggtgaggtgttcgacggg
gccccagagctgcaactggactgtctctgcagtggtgacgaccacagtagtgcagaaatg
aagcatgagggaaacctcctccccctggaaccaccccgccatgcagggttttccagcccc
ccccagaaagggccttcctcattagctgagaagaatagcccgctgctcatggagcccagc
aacatcaaggccgaccccgccggcgacatgcctgccaacacagagggtcagccggtgaag
aggaagaagggtccagcccccaagatgctggggaacgaggtgtgcagcgtgtgcggggac
aaggcctcaggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttccgc
cgcagcgtcatcaagagcgcccagtactcgtgcaagaacaacggccgctgtgagatggac
atgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgcgaggcgggcatg
ctggagcaatgcgttctctcagaggagcagatccgagtgaagaaaatgaagaagaacgag
gaagagactgcacgcacgtctaccgtggtgacccccaccccggtgccggaggtggtcccg
ctggcgcccgagcagctggagatgatcgagaagctggtggccatgcagaagcagtgcaac
aagcgctcgttcatcgaccggcccaaagtcacggtgattccgtggccccagagtcaggac
ccccagaacagggaggtgcggcagcagcgctttgcccacttcactgagctggccatcatg
tcggtccaggagatagtggactttgccaagcagttgcctggcttcctagagctcaccaga
gaggaccagattgccctgctgaagacctcaaccattgagatcatgctgctggaaacatcg
cggagatataaccctgccattgagagcatcacgttcctgaaggacttcagttataacaag
gaggattttgccaaagcagggctgcagttggagtttattaaccccatctttgagttctcc
aagggcatgaacgacctgcacctggacgaggcggagtacgctctgctcattgccatcaac
atcttctctgcaggtcagaggtcaagtgaccggcccaatgtgcaggaccatgaacttgtg
gagcgactgcagcagccgtacgtggacgcacttcgttcttacatcatgatcaagagacca
aacgatcacctgatgtttccacgcatgctcatgaagctggtcagcctccgcaccctcagc
agcgtccactctgagcaggtcttcgccctacgcctccaggacaagaagctcccgccgctg
ttatctgaaatctgggacgtccacgagtga
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