Salmo salar (Atlantic salmon): 106562416
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Entry
106562416 CDS
T04363
Symbol
MMP2
Name
(RefSeq) 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
106562416 (MMP2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106562416 (MMP2)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
106562416 (MMP2)
Peptidases and inhibitors [BR:
sasa01002
]
Metallo peptidases
Family M10
106562416 (MMP2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
106562416
NCBI-ProteinID:
XP_013982767
UniProt:
A0A1S3KVU5
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All DBs
Position
ssa11:complement(30051338..30074174)
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AA seq
659 aa
AA seq
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MGCHTAFSPRHLVLKVLLVQLIAFLQKTSAAPSPIIKFPGDDSPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDVAQYNFFHRKPKW
QQNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFMF
MGKEYNSCTNQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
ENYDGCTTQGRDDGYRWCATTENYDNDKSYGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTASGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPMYTFTKNFRLSNDDIKGIQELYGAGTDKPVPPTQGPVTPMDICNEPVVFDAVAQIR
GETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENPLEEKTVFFAGNEMWI
FNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDKFWRYNEAKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSLKIVKLGEITKDWLGCH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccacacggcatttagcccccgacaccttgtcctcaaagtgttgttggtacag
ttaatcgcctttctccagaaaacctctgcagctccctcgcccattatcaagttcccggga
gacgatagtccaaaaacagacaaagaagtggctctgcactatctgaacaagttctatggc
tgcccacaagacagatgtaatctcatggtgttgaaggacaccctgaagaaaatgcagaag
ttcttctcgctacaagagacgggcgagatcgaccccaagacagtggagatcatgaagaag
ccccgctgtggagttcctgatgttgcccaatacaacttcttccataggaaacccaagtgg
cagcaaaacgccatcacctacaggattctaggccactctcctgacctggacgaggagact
attgatgacgccttcttaagggccttcaaagtgtggagtgacgtcaccccactcaagttc
acccgcctcatggatggagaggctgacatcatgattaactttggccgcaacgagcatgga
gatggctaccccttcgatggtaaagatggtctgctggctcatgcctttgctcctgggcca
ggcaccgggggagactcccactttgatgacgacgagcagtggaccctgggagaaggacaa
gttgtgaaggtgaagtttggtaatgcagagggggagttctgtaagttccccttcatgttt
atggggaaggagtacaacagctgtaccaatcagggccgtgatgatggattcctctggtgc
tccaccacatacaactttgacgacgacggcaaatacggtttctgtccccatgaattgctg
ttcaccctgggtggaaacgcggacggagctccctgtaagttccccttcacgttccaaggg
gagaactatgatggttgcaccactcaggggcgtgacgacggctaccgctggtgtgctacg
actgagaactatgacaatgacaagtcctacgggttctgccctgaaacagccatgtccacc
gttggaggaaactctgagggttccccctgtgtgttccccttcacgttccttggagacact
tatgacagttgcaccgcttctggacgtagcgacggcaagatgtggtgcgcctccaccaag
agctacgacgatgaccgcaagtggggcttctgtcctgatcaaggctacagtctgttcctg
gttgcggcacatgagtttggccatgccctgggcttggagcactcccaggaccctggtgct
ctgatggcccccatgtacaccttcaccaagaactttagactgtctaacgacgacatcaag
ggcattcaggagctctatggtgctggtacagacaagcccgtgcctcccacccagggccca
gtcactcctatggacatctgtaatgaacctgtggtgtttgatgctgtggcccagatcaga
ggagagaccttcttcttcaaggacaggttcatattcaggtcaaccaacttccggggcaag
ccttcaggtcccatgctggtagccacctactggcctgagctccctgttaccatcgacgct
gcctatgaaaacccactggaggagaagactgtgttctttgcaggcaatgagatgtggatc
ttcaatgcagaccagatagagaaaggctaccccaagagaatctcctctataggcctgccc
acagacctgaaaggcattgacgcagccttctccttcggaaagagccagaagacctacctg
ttcgctggagacaagttctggaggtacaatgaagccaagaagaagatggaccctggcttc
cccaagctcatcgctgactcctggaacggaatcccagacggcattgactctgcctttagt
ctgaatggcattgattacacctacttcttcaaaggtgcccactacttcaaaatggatgac
agtagcctgaagatcgtcaaactgggcgagattacaaaggactggctgggttgtcactaa
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