Salmo salar (Atlantic salmon): 106563799
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Entry
106563799 CDS
T04363
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106563799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106563799
03032 DNA replication proteins [BR:
sasa03032
]
106563799
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106563799
mRNA cycle factors
Common to processing body (P body) and stress granule
106563799
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106563799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Spectrin
Motif
Other DBs
NCBI-GeneID:
106563799
NCBI-ProteinID:
XP_013985134
UniProt:
A0A1S3L3L7
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All DBs
Position
ssa11:complement(85322416..85348778)
Genome browser
AA seq
1305 aa
AA seq
DB search
MEREEPRDRETEREEPRDRGTERDKQRGNNRPRDRERDGEMERNRERPAEGNERSRANTS
PNNHHHHPSSSSKRYSKSDIRRPRNRTYSTSSASSGTSLDGPGLGQGGGLGEDRARRDRL
GRRERERGEGGGGGGGQLQNRRRSARDSSTDSMEESKVGDWMDERRRRRRRDGEEDWSPE
RRKRGEESRGTGGRHRGGRGRGGLLRISHSDRQSGSSQATSGPGEDPQGRRRQGTGPCGR
GRGILILPAHTNLSNLPAEPGPRLLFGGIRGGREVGLGRGGGRGGGTRRLWDPNNPDQKP
ALGLSQHASLQQQQPMYLQTGVGYGALHFLDTDDEAAGSPPVHQAEHFHLQQQAAAMAQA
FYKYQNSDNPYPYNANPNPNTRYPYPYHTMPAGPYQIPPSNDMYHPGQFYGGYRGQGYPD
GPEAAAGGGSGAGLTPEEAGQHARGELGRLLRAADSQELQLTNLLSRDRLSADGLDRMAQ
LRAELLTLYERVILTDIEFSDSQNMDQALWKNVFYQVIERFRQLLKDPSGDSAPRITAML
LTLLDEGAVFFDALLQKLQMVFQFKLEDYMDGMAIRPRPLRKTVKYALISAQRCLICQGD
IARYREQASDSANYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLA
ASNPILTAKESLMSLFEETKRKADQMGRRQESEGGSRGPGVRGGGRGRGEQGARVEIWLR
PVVQAGALSSHRGGSESSRDSEQDGELGNLSASDLNKRFILSFLHAHGKLFTKVGMESFP
EVVSRVLQEFRALLQHSPSPLGRTRLLQIITINMFTIHNAQSRGGDGEVRSVLQEQTTSL
GLAMFSLLVQRCTELLRDTPAEPIPEEEREEGDEWEEGMVKVSAFPLDLRELLPSVKVWS
DWMLGHPDQWNPPPCSIDGCSSGVWRSLADLCNALARVDHGEAPLYKADGDGDEGDEELR
LLLLEEDRLLAGFVPLLAAPQEPCYIDLTRDTVIAADCKRVTVLKYFLEALCGQEQPLLA
FKGGKYVSMATSPQPSSPGDAHSRHDSLTERESDDVIVEAESSVSEGDEGGGSEDDIREL
RARHSALTNRLAQQQRRRDKIQAVLQTCGQLELEVRPLFLVPDTNAFIDHLTSLKTLLQS
GTYILVVPLIVITELDGLAKGQESCGGSGGGRGGGGSRGNPGATHARAVQEKAKVAVAFL
ERGFEAREPCLRALTSRGSQLESIAFRSEDTSGQQGNNDDVILSCCLHYCKDKAKDFMPA
QRDGPVRLRREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAKVG
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagaggaaccgagggatagagagacagaaagagaggaaccgagggataggggg
acggagagggacaagcagagagggaacaacagaccccgagacagagagagggatggagag
atggagagaaacagagagaggccagcggaggggaacgagaggagcagagccaacactagt
cctaacaaccaccaccaccacccatcatcgtcctctaagcgttactccaagtcagacatc
agaagacccaggaaccgcacctacagcaccagctctgccagcagtggcaccagtctggac
ggacctggactgggacagggaggggggttgggggaggacagggcccgacgagaccggctg
gggcgcagggagcgagagagaggggagggaggaggaggaggaggtggtcagctccagaac
aggaggagaagcgctagagactcctctactgactcaatggaagagagcaaggtgggagac
tggatggatgagaggaggaggagaaggaggagagacggagaggaggactggagcccggag
aggaggaagaggggggaggagagcagagggacaggagggaggcacagaggaggaagaggg
agaggaggtctcctgagaatatctcacagtgacagacagtcaggctcctcccaggctacc
tcaggccccggcgaggacccccaggggcgacgcagacagggcactgggccttgcggcagg
gggaggggcatcctcatcctccctgcccacaccaacctctcgaatttgccggcggagccc
gggccgaggctactgtttggtgggatccgtggaggaagagaagtgggactagggagagga
ggaggaaggggcggaggaacaaggcgtctctgggacccgaacaaccccgaccagaaaccc
gccctcgggctctcccagcatgcatcgctccagcagcagcaacccatgtacctgcagaca
ggcgttggttacggagcactgcacttcctggatacagatgacgaggctgcagggagtccc
ccggtccaccaggcggagcacttccacctgcagcagcaggctgcagccatggcccaggcc
ttctacaagtaccagaactctgacaacccttacccttacaacgccaaccctaaccccaac
acacgctacccctacccttaccacactatgcccgccggcccttaccagatccccccctct
aacgacatgtaccacccaggtcagttctacggggggtacaggggccaggggtacccagat
ggacccgaggcagcagcagggggtggatccggagcaggtctaacccctgaggaggctggg
caacatgccagaggagagctggggagactgctgagagctgcggacagtcaggagttacag
ctcactaacctgttgtctcgagacagactcagtgctgatggactggaccgcatggctcag
ctcagagctgagctgttgaccctgtacgagcgggtgatcctaacagacatagagttcagt
gacagccagaacatggaccaggctctatggaagaacgtgttctaccaggttatagagcgc
ttcagacagctcctcaaagatcccagtggagactcagctccgcgcatcaccgccatgctg
ttgacactgctggacgagggggcagtattctttgatgcgctgctgcagaagcttcagatg
gtgtttcagtttaaactggaggattacatggacggcatggccatcagaccacgaccacta
cgcaaaacggtgaagtatgctctgatcagtgcccagcggtgtttgatctgtcagggggac
atcgcccgttaccgggagcaggccagcgactctgctaactacggcaaggcccgcagttgg
tacctgaaggcccagcagattgctcctaagaacggacgaccctacaaccagctggccctg
ctggctgtttacacgaagaggaagttggatgcggtgtattattacatgcgtagcctggcg
gcctccaatcccatcctcactgccaaggagagcctcatgagtctgtttgaagagaccaaa
cgcaaggcggaccagatggggcggaggcaggagtcagaagggggttccaggggcccgggc
gtccggggtggaggaagaggacggggggagcagggggccagagtagagatctggcttcgc
cctgtcgtccaggcaggggctctctcatcgcaccgcgggggcagcgagtccagcagagac
tctgaacaggacggagagctcggcaacctcagcgctagtgacctcaataagaggttcatt
ctcagcttcctccacgctcatggaaaactcttcactaaagtgggcatggagtcgttcccg
gaggtggtcagtcgtgttctccaggagttcagagcactgctccaacacagcccctctccc
ctgggaagaacacgcctgttacagatcatcaccatcaacatgttcactatacacaacgct
cagagcagaggaggagatggtgaggtgaggtctgttttacaggagcagactacatctctg
ggtctggccatgttctctctgctggtccagcgctgcacagaactactgagagacacacct
gcagagcccatccctgaggaggagagagaagagggggatgagtgggaggaggggatggtg
aaagtttctgccttcccattggacctgagggagctgctgcccagcgttaaagtctggtct
gattggatgcttggacaccccgaccaatggaatcctccgccttgtagtatagatggttgt
agctctggtgtgtggcgtagcttggccgacctgtgtaatgcgttggcgcgtgtcgaccac
ggggaagcgccgctgtacaaggcagacggggacggagacgagggggatgaggagctccgc
ctgttgctattggaggaggacaggctgctggccggcttcgtcccgctgctcgccgcccca
caggaaccttgctacatagacctcaccagggataccgtaatagcagcagactgtaaaagg
gtaacagtgttgaagtatttcctggaggctctgtgtggacaggaacaacctctcctggcc
ttcaagggagggaagtatgtctccatggcaacctctccccaacccagcagccccggcgac
gcccacagtcgacacgactcactgaccgagagagagagcgatgacgtcatcgtggaggcg
gagtcgtctgtttccgagggggatgagggcgggggcagcgaagatgacatcagagagctt
cgggccagacacagcgccctcactaacagactggcgcagcagcaacgacgcagggacaag
atacaggccgtgttacagacatgtggtcagctggagttagaggtccgtcctcttttcctg
gttccagacaccaacgctttcatcgaccacctgaccagcctcaagacactactgcagtct
gggacttacatactggtggtgcccctcatagtgataacagagttggatggtctggcaaag
ggtcaggagagctgcggaggctccggcggtggtcgtggcggcggtggttcccgtggaaac
cctggcgcgactcatgcacgggcggtccaggagaaggccaaggttgccgtggcgtttctg
gagcgagggttcgaggccagagagccctgtctcagagcgctgaccagcagaggaagtcaa
ctggagtctattgccttccgcagtgaagacacctccggacaacaggggaacaatgatgat
gtcatcttgtcctgctgtctccactactgcaaagacaaggctaaggacttcatgcctgca
cagagagacggtccggtgcggttgcgtcgggaggtggttcttctgacagatgaccgtaac
ctgcgggtcaaagccctgaccaggaatgtgccggtcagagacatccccgccttcctcacc
tgggccaaagtgggctga
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integrated database retrieval system
