Salmo salar (Atlantic salmon): 106565280
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Entry
106565280 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04144
Endocytosis
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106565280
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106565280
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106565280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106565280
04121 Ubiquitin system [BR:
sasa04121
]
106565280
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106565280
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106565280
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
HECT type E3
106565280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
106565280
NCBI-ProteinID:
XP_013987694
UniProt:
A0A1S3LB36
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Position
ssa12:complement(38183718..38256771)
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AA seq
870 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHNPKWKQSLTVILTP
FSKLIFRVWSHQTLKADILLGMATLEISETLKSNDMKLSEVVQTLQLCSDRDHTDVVGDL
SVCLDGMQVDPETFTSAERDHVAVPNGEVRQNGDSVNSDNIPPRSSRDTSPSSDSTEDWV
IVPNGHTVNSMGSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTHSEVSEPPA
SYGSSLASASGASSDTPQENRAAPPQAASAPPAIGAPAGAPPAGGPPRVIPNGPLPPGWE
QRVDQNGRMYFVDHIEKRTTWDRPESLPSGWERRVDPMGRVYFVDHITRTTTWQRPTQES
VRNYEEWQHQRSQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGR
VYFVHHTTRMTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGK
SSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQMMSFHPQDL
RRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPD
HLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKD
NNLEECGLEMYFSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQ
TQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFW
QFVKEMDNEKRMRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFN
RLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaacttcaagttactgtgctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccatacgtagaggtggctgtggacggccagtcgaagaagacggag
aaatgcaacaatacccacaaccccaaatggaagcagtcactcacagtaattctcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaggccgacatcttattg
ggaatggctacattggagatcagtgaaaccctaaagtccaatgatatgaaactctctgag
gtggtgcagaccctgcagctgtgttcagaccgagaccacactgacgtggtgggggacctg
tcagtctgtctggatggcatgcaggtggacccagagacattcacctctgcagagagggac
catgttgctgttccaaacggggaggtgagacagaacggagatagtgtcaacagtgataac
ataccacccagatccagcagggacacgtccccctccagtgactccacagaggactgggtc
atcgtccccaacggccacacggtcaacagcatgggttctcctgccccatccccagggggc
tccaagtccacacggccccccagacctgcacggcctcccccacccaccccccgcagacca
gccgcttccccagcctcctccagcagctctacccatagcgaggtgagtgagcccccggct
tcatacggctcgtccctggcctcggccagcggtgcctcctcagatacccctcaggagaac
agagctgcacccccacaggcagccagcgcccccccggccatcggggcaccagccggtgca
cccccagccggtgggcccccccgagtcatccctaacggcccactgcctccaggctgggag
cagagggtggaccagaatggccgcatgtatttcgtggatcacattgagaagaggacaaca
tgggaccgaccagagtctctcccctctgggtgggagcggcgtgtggaccccatgggcagg
gtgtacttcgtggaccacatcacccggaccaccacgtggcagcgccccacgcaggagtct
gtgcgcaactatgaggagtggcagcaccagcgcagccagctgcagggggccatgcagcag
ttcaaccagaggttcatttttgggctccaggatcagcaaatagctgcagcaaacaaagag
tttgacccacttgggccgctgccacatggctgggagaagcgaacagacaccaacggcagg
gtttattttgttcaccacacaacgcggatgactcagtgggaggacccacggacacaaggg
ctgctgaatgacaagcccctacctgaaggctgggagatgaggttcacagtggatggcatc
ccctactttgtggaccacaaccggagaaccaccacctacatcgaccctcgcacgggcaaa
tcctcccttgagaacgggccccagatcacctacgtcagggacttcaaagccaaagtgcag
tacttcaggttctggtgtcagcaactgtcaatgccacagcacatcaagatcacagtcacc
cgcaaaaccctctttgaagattcattccagcaaatgatgagctttcatccacaagatctc
aggcggagactgtggatcattttccctggagaggaaggcttggactacggaggagtggca
agggagtggttcttcttgctatcccacgaggtgctgaacccaatgtactgcctgtttgag
tatgccggcaaggacaactactgtctccagatcaaccctgcctcctacatcaaccctgac
cacctcaagtacttcaagttcattggacgattcattgccatggccttgttccatgggaag
ttcatcgacacgggattctccctgcccttctacaagcgcatcttgaacaaacccctggcc
ctgaaggacctggaatccatcgacccggaattctacaactccctcatctggatcaaggat
aacaacttggaggagtgtggtctggagatgtacttctctgtggacaaggagatcctgggg
gaggtcaccactcacgagctgaagccagacggaggcaatgtcttggtcactgaggaaaac
aaagaggaatacatcaggctggtggcagagtggaggttgtccagaggggtggaggagcag
acccaggccttcttcgagggctttaatgaggtcctcccccagcagtacctgcagtacttt
gacgcgaaggaactggaggtgatgctgtgtggcatgcaggagatagacctggtggactgg
cagaggcacaccatctacaggcactatgcacgcagcagcaagcagatcctctggttctgg
cagtttgtgaaggagatggacaatgagaaacgtatgaggctgctgcagtttgtcaccggc
acctgtcggcttcccatgggtggcttcgctgacctcatggggagtaatggcccacagaag
ttctgcattgagaaggtgggcaaagaaaactggcttccaagaagtcacacttgctttaat
agactggacctgcccccctacaagagctacgagcagctgaaggaaaagctgatgtttgcc
attgaggaaactgagggcttcggacaggagtag
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