Salmo salar (Atlantic salmon): 106566027
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Entry
106566027 CDS
T04363
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106566027
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
106566027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
Atx10homo_assoc
HEAT_2
Arm_2
Motif
Other DBs
NCBI-GeneID:
106566027
NCBI-ProteinID:
XP_013989304
UniProt:
A0A1S3LFK0
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Position
ssa12:79154104..79166981
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AA seq
758 aa
AA seq
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MMTMDPLKSAMAIGNVEETSLALPSDNKLRSKQQRVLDQVQTIKRGKSKYSKNGSLSSPT
KSPTSPMYTSVFTDSIKSPTSPNGFAFSNGTNGLSRTLSYEQSTKRMVLSSKGSTVQRNM
SSSSQWERRLPLSPPVARGQRNSSRSVPDVDPFPTTTQRPAQAPASALQQLQSSAPARQL
QSNRSSFFLTERGNSQFISNGNGPSQVIVNGNDVQKKHSQLIGTRQTKSSGQITSNQTRI
ERSPSNPSMAEPKISVVKSKIEAGMNDDGQLADITMAEAVQYLSSGDVNYQHYGASFIQH
STYSEDKAKQEVLQLKGIPPLVNLLKSPSPQVQQTASAALRNLAFKDAGNKEEVQRCGGI
TEALALLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGGVDETN
KNLDPEVFYHATACLRNLSCAKQSNRQAMRNCRGLIDSLGSYVQDCVAAERPDDKSVENC
VCVLHNLSFQLENEAPALFSRISALAGTISRANASAETGPIGCFSQQSSKVQEQESHFDY
PVMEEQHPKGAGWLFHSKTMQSYLSLLRSSQREDTLEACCGALQNLTANQGIVSRVMSQS
IVQKLNGLPEISPLLQSSNPSLQKTAVALVGNLAKNQRLQSIMARQTLPELVGILSSWTK
EGTESDDTLAMACQTSHSLLMKEPELGKCLLSNNLVNSLNDLSKNKLFPKASKAAGVLLY
SLWSEKDIQSFLKKQGMNKGSFVNDITSVAHRSVQVVE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggctatggccattgggaatgtggaggagacatct
cttgctttgccgtctgataacaaacttcggtccaaacagcagcgtgtcttggatcaggtg
caaaccattaagaggggcaagtcgaagtacagtaaaaatggatctttatcgtcgccaacg
aaatcgccaacgagtcctatgtacaccagcgtattcactgactccattaagtcacctacc
agtcccaatggatttgccttctcgaatggtacaaatggcctctcaagaacgctcagctat
gagcagagcaccaagcgaatggtactgtcctccaaggggtctactgttcagagaaacatg
agcagctccagccagtgggagagacgattacctctcagtccccccgtagccaggggtcag
cgcaacagcagccgcagtgtgcctgatgtggaccccttccccaccactacacagcgccct
gcccaggccccggcttcagccctgcagcagttgcagtcctcggcccccgcccggcagctc
caatccaacaggtccagcttcttccttactgagaggggcaacagccagttcatctccaac
ggcaacggcccctctcaggtcattgtcaacggcaacgatgtgcagaaaaagcacagccag
ttgattggcacccgtcagacgaaaagcagcggccaaattaccagcaaccaaactcgtatt
gagaggtcaccatcaaacccctccatggccgagcccaagatatcagtggtcaagagcaag
attgaagcagggatgaatgatgatggccagcttgctgatattaccatggcggaggcggtg
cagtacctgtccagtggagatgtgaactaccagcactatggcgcctcattcatccaacac
tctacctactcagaggacaaggccaagcaggaggtgttgcagctcaaagggatccctcct
ctggtgaacctgctgaagagtcccagtccccaggtccaacagacagcctcggccgccctg
cggaaccttgcctttaaagatgcgggcaacaaggaggaggtccagcgctgtgggggcatc
actgaggccctagccctgctccgagacacagactctaccgagacacagaaacaactcaca
ggtcttctttggaacctgtcgtctgcagacagtctgaagccagagcttgtgcgtagcgct
ctgcctgttctgactgagactgtggtagtaccttacacaggaggagtagatgagaccaac
aagaacctggacccagaggtcttctaccatgctacagcatgtctaagaaatctgagctgt
gcgaagcaaagcaacaggcaggccatgcgtaactgtcgaggcctcatcgactctctgggc
agttacgtccaggattgtgtagctgcagagaggccagatgacaagtctgtggagaactgt
gtctgtgtcctgcacaacctgagcttccagctggagaatgaggccccggccctgttcagc
cggatctctgccctggccgggaccatcagccgggccaacgcctccgctgagaccggcccc
atcggctgtttcagccaacagagcagcaaggtccaggagcaggagagtcactttgactac
cccgtgatggaggagcagcatcctaaaggagcaggttggctcttccactccaagactatg
cagagttacctgtctctgctgaggtccagccagagagaagacaccctggaggcctgctgt
ggagccctgcagaacctcaccgctaaccaaggcattgtttctagagtgatgagccagagc
attgtccagaagctgaatggcttgcctgaaatctctcccctgctgcaatcctccaacccc
agcctacagaagacggctgtggctttggtgggaaacctagccaagaaccaacgccttcag
agcatcatggcccgacagaccttaccagagctggttggcatcctcagctcatggaccaag
gaagggacggagtctgacgacaccctggccatggcgtgccaaaccagccacagtcttctg
atgaaggagcctgagctggggaagtgcctgctgagcaacaacctggtcaactcactcaac
gacctgagcaagaacaagctgttcccaaaggcaagcaaagctgcaggtgtgctcctctac
agcctctggtcagagaaggacatacagagtttcctaaaaaagcaagggatgaataagggt
tcctttgtgaatgacatcaccagtgtggctcacaggtctgtgcaggttgttgagtaa
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