Salmo salar (Atlantic salmon): 106566759
Help
Entry
106566759 CDS
T04363
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106566759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106566759
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106566759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_1st
Ig_NUP210_4th
Ig_NUP210_9th
Ig_NUP210_7th
Ig_NUP210_6th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
106566759
NCBI-ProteinID:
XP_013990598
UniProt:
A0A1S3LI25
LinkDB
All DBs
Position
ssa13:18798619..18848621
Genome browser
AA seq
1875 aa
AA seq
DB search
MAIFALNTLSVFLLISSSIHTTSASSKLNIPKVLLPLARSTRINFTLEATEGCYRWSSTR
PEVASIEAVEADLSRQCSQRAVLQACSTHSSRLTSIILAEDVVTGQVLRCDAIVDIISEI
QIVSTTRELHLEDSPLELKIHALDSEGNTFSSLASLVFDWTIVKDADMDGFPDSYTSLRV
LKFSESTYTPSGYISEMERVGKQGDIILVSGLKTGHAKLKAKIQESLYKNVGAAEVKLLI
LENILLSPACDVYLLVGTSIQYKVQKIRQGKITEISMPCDQYELYLQDGVAGADGNTDLA
VASLDQSTSTVNALQLGHINVLLDHKSLRMQRVSRMPNGTLYVVEPVYLGLTMNPVESWV
LETGRVYNILIEVFDKSSNRIYLSDNIRIEAVFPDEYFEILESSLNGSYHRVKALNNGLT
LIDATLKSVVDHDGGVHELANPVHNEQDVEIYNPIVLSPSILTFPWQPKVGAYQYTIRAA
GGSGNFSWSSSNLAVATVTVKGVMTTVSDIGVSVVYAHDVRNPMHYGTMKVYVVEPVGMD
FSPCPVEARVRLALELPLRIFGLLGEGGGEERVMLSDCSHIDLQVEEENQGVFQLLEGRL
APGQNHCSGVRAQALATGYTALTVSYTHGNVYLSAKITIAAYPPLKAVDPASVALVTLGS
SKLMLFEGGPKPWILEPSKFFLNLKAEDDNGVRLALTGSTSRSYLRHWFRATCRAIGEQI
LAVTVGNQPSLTNPYPAVEPAVVKFVCAPPSRLTLVPVYISPQLDLTCPLLQQNKQLVPV
SNYHNPVLDLAAFDQQGRKFDNFSSLSIVWESTKVSLASIEPTMPMELELLEDSNKQKRL
HGRQVVLVHHQSGIAAITVTALGYQAPHLEAAKVLSPFDPLTPVSATLELLLVEDLTVSP
EAVTIYNHPNVRADLALWEGSGYFFVNTSVGGIAYVVHKEAQGSAEVLPVQPGTVQVMVH
DLCLALPAPATATVHISDILEVYVRLVDKVEIGQSVRAHVRVLDDNNKPFLAKYFHFMNL
KLTVTSAIVSLQALSDLSEKDTAIFLVKGLAIGQTSVSAMLVDRTGRKIVSAPQKIEVFP
PFKLIPRKMTLIIGAMTQITSEGGPQPQSNILFSMANEEIASVNGIGHVRGVAIGNVTVT
GLVQAVDAETGKLVVVSQDQVEVEVVQLRAIRIQAPITRMKTGTQMPVYVIGLSSSQTPF
SFGNALPGLTFHWTTTKRDILELQSRHAEASVQLQPEHNFAMSVTGKTKGRTGLKVVLKV
TDTKAGQLEGNLLELIDELQMQVYDKLHMLNPAMEAKDILMAPNSGLKLQTSRDGVGSLS
YRVLDCPNQATIVQVDEKGLLSSGSLTGSSSLLVTSQETFGVNQTLVLAVKVVPVSYLRF
STSPILHRDRLSAIPLGMVLTFTVHLHANTGEVLHSHNSLLTFTTNRDDLVQVGRGPCNN
SLTVRTVNIGLTLLAVWDEENTGMADYLALPVQHAIHPEDATMLVVGDVVCLSTQHLSPQ
GVPGTWSSSSTGVLQVDSKTGVGVARDAGTATVYYEITGLLKTYREVVVEGPTRTAVRGD
KDTRVLLTTREGGNNLIGSCSSAQTASIALLHPETSVSCLLSFTSDAVEFSAHNVYLTNT
SFDPSTGFYSCSLTLQPLSDQQTRVLSLSMTSLLVSAGVKGSAFSGEQVCARLPVETGLY
SDQTELLLSNLQPSAELTVYGPASALDSLKVSSSSLSISVQERGVSNGFPSFLKYMVSAM
DPQAAASASVSITSSSTGHTLVIPVTLIHVADPSTTMQAAAPVVTMEGAHFLQGFIDSYQ
MMFFTIFTLLTGTAIIIIVCHALFSEKDLAPHPAFIQRTPPPSGFNSNSFVHKMTSPDPM
SSHKPRLFSPDYYSR
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttttgcgctgaacacgctatcagtgtttttgttaatatcaagttcaattcac
accacaagtgcctcatcaaagttgaatatccccaaagtgttattaccacttgcccgaagc
accagaataaacttcacattggaagcaactgaaggctgttacagatggtcttccaccaga
ccagaggtggccagcatcgaggctgtagaggctgacctcagccgacagtgttcccagaga
gctgttctccaggcctgctccacacattcctccagactcaccagcatcatactggctgag
gatgtcgtaacgggacaggtgctgcgctgtgatgccatcgtggacataatcagtgagatc
cagatagtgtccaccaccagagagctgcacctggaggactcgccattggaactgaagatc
cacgcactggactctgaaggaaacaccttcagtagtctggcgagcttggtgtttgattgg
accatagtgaaagatgcagacatggatggtttccctgactcctacacctcattacgggtt
cttaaattctctgagtctacttacaccccctctggttacatctctgagatggagagagtg
gggaaacagggagatatcatcttggtgtcaggactgaaaacgggccacgctaagctcaag
gcgaaaatacaagaatcgctgtataagaatgtaggtgcagcagaggtgaaactgctgatt
ctggagaacatcctgctgagccctgcatgtgatgtctacctgctggtgggcacatccatc
caatacaaggtccagaagatcagacagggaaagatcacagagatctccatgccctgtgat
caatatgagctgtacctccaggacggtgtggctggtgctgatggaaacactgacctggct
gtggctagtctggaccagagcacctccactgttaacgccctgcagctgggacacatcaac
gtgctgctggatcacaagagccttcgcatgcaaagggtgtctcgcatgcccaacgggact
ctgtatgttgtggaaccggtatacttgggattgacgatgaatcctgtagagagctgggtt
ctagaaacaggacgagtgtataatatcctcatcgaagtgtttgacaagtcaagcaatagg
atttacttatccgataacatcaggatcgaagctgtgtttccagatgagtactttgagatt
ctagagtcctccctgaatgggtcctaccaccgtgtcaaggctttgaacaacgggctaaca
ctaattgatgctacactcaaatctgtagtggatcatgatggaggagtccatgagctggca
aacccagtccacaatgaacaggatgtagaaatctacaatcccatagtcctcagtcccagt
atcctcacgtttccatggcagcccaaggttggagcctaccagtacacaatacgggcagct
ggaggcagtgggaatttcagctggtcctcctctaacctagccgttgccacggtgacagtg
aaaggagtgatgacgaccgtcagtgacattggcgtcagtgtggtatacgcccatgatgtc
cgcaacccaatgcactatggaacgatgaaggtgtacgtggtggagcccgtggggatggat
ttctctccctgcccggtggaggcccgcgtgcgccttgcgctggagctgcccctccggatc
tttggcctgctaggggaggggggaggagaggaacgggtgatgctgagcgactgcagccac
attgacctgcaggtggaggaggagaaccagggggtgttccagctgctggagggtagactg
gctccagggcagaaccactgcagtggggtaagggcccaggctctagccacaggatacaca
gccctaacggtcagctacacccacggcaatgtctacctcagtgccaagatcaccatcgct
gcctacccaccactcaaagctgtggaccctgcctctgttgccttggtgaccctgggctcc
tctaagctcatgctgtttgagggcggccccaagccatggattctagagccctccaagttc
ttcctgaacctgaaggctgaggatgacaacggggttaggctggctctgaccgggtccacc
tcccgtagctacctccgacactggttcagagccacctgtagagccataggagaacagata
ttggcagtaaccgtggggaaccagcccagtctgaccaatccctatcctgcggtggagccg
gcggtggtgaagtttgtgtgcgcccctccctctcgcctcaccttggtgcctgtgtacatc
agtccccagctggacctcacctgccctctgctgcaacagaacaaacaactggtgcctgtc
tcaaactaccacaaccctgtgctggacctggctgcctttgaccagcaaggcaggaagttt
gacaacttcagctctctgagtatcgtctgggagtcgaccaaggtatccctggccagcatt
gagcccaccatgcctatggaactggaactactagaggacagcaacaaacagaagagactt
catggtcgtcaggtggtccttgtccaccaccagtctgggattgctgctataacagtaaca
gctctgggttaccaggccccccaccttgaggctgctaaggttctcagtccgtttgaccct
ctgacccctgtctcagccactctggagctcctattggtggaggacttgacagtcagtcct
gaagctgtcaccatatacaaccaccctaacgtgcgggctgacctggccctgtgggaggga
tctgggtatttctttgtcaacaccagtgttggcgggatagcatacgtggtgcacaaagag
gcccagggatctgctgaggtgcttccagtccagccggggacagtgcaggtgatggttcat
gacctctgcctggccctccctgcccctgctacggctacggtccacatctcagacatcctt
gaggtttatgtccgattggttgacaaggtggagattggtcaatctgtgagagcccatgtc
agggttctggatgacaacaataagcccttcctggccaaatatttccactttatgaatttg
aaactcactgtaacttctgccatcgtctctctgcaagcattgtcagatctctcagagaag
gacactgctatcttcctggtcaaagggttagctattggacagaccagtgtttctgctatg
ctagtagacagaactggaaggaagattgtatctgctcctcagaaaatagaggtctttcca
ccattcaaactgatccccaggaaaatgactctgataatcggagcaatgacccagatcaca
tccgagggtggcccacagccccagtccaacatcctcttctccatggccaatgaggagata
gcgtctgttaacggcataggtcacgtcaggggcgtcgccattggcaacgtcaccgtgaca
ggactggttcaagctgtcgatgccgagactgggaaacttgttgttgtctctcaggatcaa
gtagaggttgaagttgtgcagttgagggccattcgcatccaagcccctatcaccagaatg
aagactgggacacagatgcctgtatatgtcatagggctcagcagcagtcagacccccttc
tcatttgggaacgccctgcctggcctcaccttccattggaccaccaccaagagagacatc
ctggaactccaatcacgacatgccgaggcctccgtccagctccaaccggagcataacttt
gcgatgagtgtgacagggaagactaaaggaaggaccggcctcaaggtggtcctaaaggtc
actgacaccaaggctggacaactggagggaaatctactggagcttattgatgaactccag
atgcaggtttatgacaagctgcacatgcttaacccagccatggaggctaaggacatactg
atggctcccaactctgggctcaaactccagaccagcagggacggtgtaggttctctgtcc
taccgggtgctggattgtcccaaccaggctaccattgtccaagtggatgagaagggcctc
ctgtcctctggctctctcactggctcctcctccctgctggtgacctcacaggagaccttc
ggtgtcaatcaaacactggtcctcgcagtgaaggtggttccagtgtcgtacctgcgtttc
agcaccagtccaattctacacagagaccgcctctctgctattcctctgggcatggtcctt
actttcactgttcacctccatgctaacaccggagaggtccttcacagtcacaactccctg
ctcacgttcaccaccaacagggatgacctggtgcaggttggccgaggcccatgtaacaac
agtctgactgtgcggacggtcaacatcgggctcaccctgctggccgtgtgggacgaggag
aatacggggatggctgactacctggcgctgccagtccagcatgctatccacccagaggac
gccacgatgctggtggtgggagatgtggtttgcctgagtacccagcacctcagcccccaa
ggtgtaccgggtacctggagctcatcatccactggcgtgctgcaggtggactctaaaacg
ggcgtgggcgtggccagagatgcaggcaccgccactgtctactatgagatcactggcctg
ctgaagacctacagagaggtagtggtggaagggcccaccaggacagcggtgaggggggac
aaggacaccagggtgctgctcaccaccagagagggagggaacaacctcatagggtcctgt
tcctcggcccagactgcgtctatcgccctgctgcacccagagacctccgtcagctgcctt
ctgagcttcaccagtgacgctgtcgagttctccgcacacaacgtctacctcacaaacacc
agcttcgatcccagcaccggcttctactcctgctctctgacattgcagcctctgagtgac
cagcagacccgggtgctgagcctgtccatgaccagcctgttggtgagtgctggggtgaag
ggcagtgctttctctggggagcaggtctgtgccaggctgcctgtggagaccggcctgtat
tctgaccagacggagctgctgctcagcaacctgcagcccagcgcagagctcaccgtctac
ggccccgcctcagcactcgacagcctgaaggtatcgtccagttctctgtccatctcggtt
caggagagaggggtgtctaacggcttccccagtttcttgaagtacatggtcagtgccatg
gacccccaggctgcagcctccgcctcagtctccataaccagctcatccactggccacacc
ctcgtcatcccagtcaccctcatccacgtggctgaccccagcaccaccatgcaagctgct
gctcccgtggttaccatggagggagcccatttcctgcagggcttcatagactcctaccag
atgatgttcttcaccattttcactctactgactggcacggccatcatcatcattgtgtgt
catgcactgttttctgagaaggacttagcacctcacccagccttcattcagagaacaccg
cccccttcaggtttcaactcaaactccttcgtccacaagatgacctccccggacccaatg
agcagccacaaaccacgactcttctccccagactattattcccggtag
DBGET
integrated database retrieval system
