Salmo salar (Atlantic salmon): 106567666
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Entry
106567666 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37-like
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106567666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106567666
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106567666
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106567666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HlyD_2
zf-C3HC4_2
MRFAP1
PIN_8
Motif
Other DBs
NCBI-GeneID:
106567666
NCBI-ProteinID:
XP_013992691
UniProt:
A0A1S3LP97
LinkDB
All DBs
Position
ssa13:complement(69711894..69739057)
Genome browser
AA seq
972 aa
AA seq
DB search
MRRYCIEISPNFLHLKKTELAEMDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFS
CIRRWLTEQRAQCPHCRAPLQLRELVNCRWVEEVTQQLDTLQLCNLSKHEENDKDKCENH
HEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELI
SLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLLTLMGQKTSLTQETELL
ESLLQEVEHQLRSCSKSELISKSPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDS
STFVLENFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPET
SKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLV
LRYQVRSPTFFQKCRDQYWYISQLESAQSSYIQQINNLKERLAIELICRQQSRSSSPPNR
RLGPSTSERDSHSGKGPVAEDSCQTTETKEEEEEKTQHDDSNELSDGDLEVDCLTGDEEV
NPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEFSRNLEMEEGELPVDVAGAAGSSNP
GARCLRRGGGLSSTGSNNSLLEIDPVILIQLLDLKERSSVESLWGLQPRPPASLLHSQVQ
VHSRKERGERRPQTVRRGAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGETKAGPSSGA
TGVEQGPSYHSELGPSRKSIELDLMGKGPGVSRHCRSGGKKASSPKQDGSRLGLRRAADV
VEKELRGQSGGESSSDQSLFPRGTSNVSEGALKPRSAHSSPPYLGSSSSCSENKPCSSKH
DQEQLYGSDLYALEVLSGISTATMTRPRTKPMGAGLLTDSSLDWDSEPAEIHQSLLSLAE
EPSSCPNEGHVVQKRTVVLLPGMSSDSEIDCDTENEDEVVALEAGDCRYDTPALPCAGDQ
LISDLSFTTGER
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtattgcattgagatttcacccaatttcctccacttgaagaaaactgaactg
gctgagatggatgaacaaagtgttgagagtattgcggaggtgtttcgttgtttcatctgt
atggagaagctgcgggacgctcggctctgcccccactgctccaaactctgctgtttcagc
tgcataaggcgctggttgaccgagcagagagcccaatgcccacactgtcgggcaccactg
cagctgcgggagctggtgaactgccgttgggttgaggaagttacccagcagctggacacc
ctgcagctctgcaacctctccaaacacgaggagaacgacaaggacaagtgtgagaaccac
catgagaagctcagtgtgttctgctggacctgtaagaagtgcatctgtcaccagtgtgct
ctgtggggaggcatgcatggaggccacaccttcaagcctctggctgagatctacgagcag
cacgtgaccaaggtgaacgaggaggtggccaagctccgccgacgcctcatggaacttatc
agcctggtgcaggaagtggagaggaatgtggaagcagtgcgaggggccaaggacgagcga
gtgcgagagatccgtaatgcagtagagatgatgatcgcccgtctggacaaccagctcaag
aacaaactcctcaccctcatgggtcagaagacctccctcacccaggagacggagctactg
gagtctctcctacaagaggtggaacatcagctgcgctcctgcagtaagagcgagttgatc
tccaagagcccagagatcctgctcatgttccagcaggttcaccgcaagcccatgcagtcg
tttgttaccaccccagtccccccagacttcaccagtgagctggttcctgcctatgactca
agcactttcgttctggaaaacttcagcaccctgagacagagggcagatccagtctacagc
ccaccactccagatatctggcctttgctggagactcaaggtttacccagatggcaacggt
gtggtgcggggcaattacctgtcagttttcttggaactgtctgcaggactccctgaaacg
tcgaagtacgagtaccgcgtggagatggtccaccaggcctccagcgaccccactaagaac
atcatcagggagtttgcatcagactttgaggtgggggagtgctggggatacaaccgcttc
ttcagactggacctgctggccagtgagggctacctcaacatgcagactgacactctagtc
ctcaggtaccaggtgcgttcgcccaccttcttccagaagtgcagagaccaatactggtac
atcagccagctggagtcagcccagtccagctacatccagcagatcaacaatctcaaagag
aggctggccattgagctgatctgtaggcagcagtctcgcagctcgtcccctcctaaccgg
cgtctgggcccctcgacctcggagagagactcccactcagggaaaggccccgtggctgag
gacagctgccagaccactgagaccaaagaggaggaggaagagaagactcaacatgatgac
tccaatgagctgtctgacggggatttggaggtggactgtctgacgggggatgaggaggtg
aaccctctggatggcagcagcacctctggcagctccacggcaaccagcaacaccgaggag
aacgacatcgacgaggagaccatgtctggggagaatgatgtggagttcagtaggaacctg
gagatggaggagggagaactgcctgtcgacgtggcaggagcagcaggaagctctaacccc
ggggccaggtgtctgaggcgtggtggaggtctctcctccactggcagcaacaacagtttg
ctagaaatcgaccctgtcatcctcatccagctactggatctgaaggagcgcagcagtgtg
gagtccctgtggggccttcaacccagaccccctgcctccctgctgcacagccaagtccaa
gtccactccaggaaggagcggggtgagcgcaggcctcagacagtgcggcggggagcccca
gactctggggtcctgattcggctcaaggcacagatggccgaggtgcgcagtaagatgtcg
gatgtcaagtgtcagctggaggcacggggagagaccaaggcagggccctccagcggggcc
acaggggtggagcaggggccctcttaccactcagagctagggcccagcaggaagtccata
gagctagatctgatggggaaaggacccggggtctccagacactgtcgctctggagggaag
aaggcctcatctcccaagcaggatgggagcaggctgggcctaaggagggctgcagacgta
gttgagaaggagctgagaggccagagcggtggagagtcgtccagcgaccaaagcctcttt
ccaaggggcacctccaacgtatcagagggagccctgaagccacgcagcgcccacagctcc
cctccctatctgggcagctcgtcatcctgctccgaaaacaaaccctgcagctccaaacac
gaccaggagcagctctacgggtccgacctgtacgctctggaggtcctcagcggcatctcc
accgccaccatgacacgacccaggaccaagcccatgggggccggcctgctgacggacagc
tctctggactgggactccgagccggctgagatccaccagtcactgctctccctggcagag
gaaccctcttcatgccccaacgaaggtcatgttgtccagaagcggacggtggtactgctg
ccaggtatgagtagtgatagtgagatcgactgtgacacggagaacgaggacgaggtggtg
gccctggaggctggagattgtcgctacgacaccccggcactgccctgcgcaggggaccag
ttgatctctgacctaagcttcaccacaggagagaggtga
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