Salmo salar (Atlantic salmon): 106568129
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Entry
106568129 CDS
T04363
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106568129
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106568129
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Motif
Other DBs
NCBI-GeneID:
106568129
NCBI-ProteinID:
XP_013993632
UniProt:
A0A1S3LRR0
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Position
ssa13:complement(85797844..85800808)
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AA seq
818 aa
AA seq
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MGIPIGIMFFPLRTLWMLFLLWNTIEAQTRYTIPEELNVGSVVGNIAMDLGLGISEISER
KLRIASEGGKQYFSVDLGKGELVVNERIDRENLCGQSASCMLPLEAIVQNPLQLHRVEIE
LQDINDNFPVFQNNQNFLNIAESTLTGVKFRLESAQDPDVGSNSICSYTLSKNDNFVLKV
KISKDGTKVPELALEKMLDREHIPAHSLILTAIDCGTPARSGTTKITVRVLDQNDNAPVF
EKSLYGLKLLENTLIGTVVLTVKAVDLDEGGNGEITYSFEPHNPESLQNLFSIDSQTGDL
AIKGELDFETGRYLKFDVLATDNGPLTMQGLCTVEVDVVDVNDNVPDVILKSEPTPVRED
APIGTVVALLSAKDIDFGHNGKVTLSLPPGVPFKLKQSVSNNYALVTDSILDRESYPDYT
IEIMAVDAGSPPLSSKKMIHVSVLDVNDNPPIFSQTSYTVYIRENNAAGSIMCSVSATDP
DIGENAKISYSILDSKIQDVSVSSYIYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDHGS
PSLSSNTTVHVFILDQNDNVPAVIYPSAVMGSVSHQKMPRSAKAGHLTTKISAVDADSGH
NALISYRLTEATDSSLFSVSLYTGEVRTKRAVSEQDDSSQRLLIEIKDNGDPVQSTTVTV
NILLEDGLHEPISEYRQKTTEPSKRNSKTTFYLIISLASVSVLSLLTFLILVVKCVRNSR
SSSSCCIRRAESDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSYLSPMSEFS
DFTLVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggggattcctatcggaattatgttttttcctttgcggacgctttggatgttatttctc
ttgtggaatacaatagaggcacagacacgatataccattcctgaggaactaaatgtggga
tccgtggttgggaacatagcgatggatctgggtttgggaatctctgagatatctgaacga
aaactgaggatagcctcggagggtggtaagcagtatttcagcgtggatttgggaaaaggc
gagctcgttgtcaatgagagaatagacagagagaatctgtgcggacaaagcgccagctgt
atgttgcctttagaggctatagtacaaaacccactacagctgcatcgtgttgaaattgag
ttacaggatataaatgacaattttccagtttttcaaaataatcaaaattttctaaatatt
gccgaatctacattgacaggtgtaaaatttcgtttagaatcggcacaagaccccgacgtg
ggctcaaattccatatgttcctacacgctaagtaaaaacgacaattttgttttaaaagta
aaaattagcaaggatggaaccaaagtccccgagttggctttggaaaaaatgttggacaga
gaacacataccagcacacagtctaattctgacagcaatagattgtggaactccagcccgg
tcaggcacaacaaaaatcactgttcgggtgttggaccaaaacgacaatgcacctgttttt
gaaaaatctttatatggcttgaaattgctggaaaacactcttatcggcactgtagttttg
actgtcaaagctgtagatcttgacgaaggtggcaatggcgaaataacttattcatttgaa
ccacataatcctgaatcacttcagaatctgttttctattgactcacaaacgggagatctc
gcaattaagggtgaattagattttgaaacaggacgctatttgaaatttgatgttcttgct
acagacaatggcccgctaactatgcagggactgtgcactgttgaggtagatgtcgtggat
gtgaatgacaatgttcctgatgttattttgaaatcggaacctaccccggttagggaggac
gcacctattggaactgttgtggctctgctaagcgccaaggacatagactttggacataat
gggaaagtcactctaagtttaccaccaggcgtaccttttaaattaaaacaatcagtgtcc
aataattatgctttagttaccgactccattttggatcgagaatcatatccggattacacc
attgagataatggcagttgatgctggatcacctcctctctcatccaaaaagatgattcat
gtcagtgttcttgacgtcaatgacaaccctccaattttctcccaaacatcttacactgtc
tatatcagagagaacaatgctgctggatcaataatgtgttcagtgtccgctacagatcca
gatataggtgagaatgcaaagatctcctattctatattagactctaaaatacaagacgtg
tcagtctcctcctatatttacatcaactcagataacggcagcatctacagcatgcactcg
tttgactatgagaaactaaaggtgtttcagattcaggtgcaggcaaaggaccacggctct
ccgtctctgagcagcaacaccacggttcatgtttttatcctggaccagaacgacaatgtc
cccgctgttatttacccctccgctgtcatgggctctgtctcccatcagaagatgccccgg
tccgctaaagcaggccacctcacaactaagatatcggcagtggacgcagactcgggccac
aacgccttgatttcctataggctgacggaggccacagactcgtctctgttcagtgttagt
ctttacacaggtgaggtgaggacaaaacgcgctgtttcagagcaggatgactcctctcag
aggctgcttatagagataaaggacaatggggatccggtccagtccaccacagtcacagtc
aatatactgttagaggacgggctacacgaacccatctcggaataccgccagaaaacaaca
gagcccagcaagagaaacagtaaaaccaccttttatttgatcatctctctggcctcagtg
tccgtcttgtctttgttaactttcctcatcttagtggtgaagtgcgttagaaacagtagg
agcagctcgagttgctgtatcagacgggctgaatctgatggatacaagaatcccaacaga
aacctgcagatccagctgaatactgacggccctattaagtatgtggaggtcctgggaggg
gacatgttgtctcagagccagtcgttcaggtcgtatctctctccaatgtcagagttcagt
gatttcaccctcgttaagcccagcagcaccactgactttaaggaaatgataaacgtgctt
gacgcatctttaccagacagtgcgtggacgttcgagagccaacaggtgagctcatag
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