Salmo salar (Atlantic salmon): 106571097 Help Entry 106571097         CDS       T04363                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04115   p53 signaling pathway sasa04145   Phagosome sasa04148   Efferocytosis sasa04350   TGF-beta signaling pathway sasa04510   Focal adhesion sasa04512   ECM-receptor interaction sasa04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sasa00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     106571097   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106571097  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     106571097    04148 Efferocytosis     106571097   09143 Cell growth and death    04115 p53 signaling pathway     106571097   09144 Cellular community - eukaryotes    04510 Focal adhesion     106571097   09142 Cell motility    04820 Cytoskeleton in muscle cells     106571097  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sasa04131]     106571097   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sasa00536]     106571097 Membrane trafficking [BR:sasa04131]  Endocytosis   Phagocytosis    Opsonins     106571097 Glycosaminoglycan binding proteins [BR:sasa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106571097 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 EGF TSP1_CCN cEGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  106571097 NCBI-ProteinID:  XP_013999241 UniProt:  A0A1S3M8F6 LinkDB All DBs Position ssa15:complement(18790013..18808621) Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLWTCESVRVAESRDDNSVYDLFELVQIPKKNHGVTLVKGDDPYSPAYKI LNPDLIPEVPESSFRDLIYSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPITARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQNSVLTDGI IIMDNPINGSSPAIRTDYTGHKSKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKLLMNRAGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVSDGECCPRCGTLSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGEG RQTEKCTKSPCPINGNWGPWSLWDTCSSTCGGGAQTRKRLCNDPAPKYGGKECQGDSKAT QLCNKNACPIDGCLSNPCFPGTKCTSFPDGTWSCGKCPTGYSGDGIKCKDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPARYSGPQPFGRGVEEATVKKQVCTPLNPCLDGSHDCN KNARCNYLGHFADPMYRCECKPGYAGNGHICGEDSDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMKDSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctattgatgctttggacctgcgagagcgtacgagtt gcagagagccgagacgacaatagcgtgtacgacctgttcgagctggtccaaatccccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgaggtccccgagagctccttcagggacctcatttattcc atccacgccgagagaggattccttctccttctcaacttcaagcagtttaagcggaccagg ggctcccttctgacggtggaaaagcgggacgggtccggagccgtgttcgagatagtctcc aacgggaaagcgaacaccctggatgtggttttctccacagtgaataagcaacaggtggtg tcgatagaagatgtggacttggcaacgggccactggaagaatattacgctgtttgtgcag gaggaccgggcgcagctgtatgttggctgtgaggaggtgaacacggcggaactggacgct cccatccagagcatcctcactcaggagactcccatcacagcgcgtctcagaatcgggaag ggagcggtgaaggacaggttcatgggggtgctccaaaacgttcgctttgtctttggaacc actttagaagcaatactgcgcaacaaaggatgccaaaactctgttctgactgatggaatc atcattatggacaaccccatcaatgggtccagccctgccattaggactgactacactggc cacaaaagtaaagacctgcagatgatctgtggattctcctgtgaggacctggctggcatg ttcaaggaactgaaggggttgggagtggtggtgaaggagctgtctaacgagctgcgcaaa gtgacggatgagaacaagctgttgatgaacagagcggggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggcagagtggaccgtcgacgactgcactgagtgc acttgtcagaactctgccaccgtatgccgcaagatctcctgcccgctgatcccctgtgcc aacgccaccgtgtccgatggagagtgctgcccacgctgtggaacactgagtgactatgcg gaggacggctggtccctgtggtctgaatggacacactgttccgtgtcgtgtgggcggggc atccagcagcgaggccgctcctgcgatcgtattaacaacaactgcgagggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgtctctgcaactcccccacaccccagctgggaggcaaggactgccagggagaggga agacagactgagaagtgcaccaagtcaccctgccccatcaacggtaactggggaccctgg tcgctatgggatacctgctcttccacctgtggaggaggagcccagacacgtaaacgtctc tgcaacgaccccgcccctaaatatggtggtaaggagtgccagggtgactccaaggccact cagctgtgcaacaagaacgcctgtcccatcgatggctgtctgtctaacccctgctttcct gggaccaagtgcaccagctttcccgatggaacatggagttgtgggaaatgtcccactggt tactctggtgacggcatcaagtgcaaggacattgacgagtgtaaagaggttcctgatgct tgcttcgtgttcaacggagtgcaccgctgtgagaacactgaccctggctacaactgtctg ccctgtcccgcacgctactctggacctcagccctttggcaggggagtggaggaggccacc gtcaagaaacaggtgtgtacaccacttaacccttgcttggatgggagccacgactgcaac aagaacgcacgctgtaactacctgggacactttgctgaccccatgtaccgctgtgagtgt aagcctggctatgctgggaacggacacatctgtggtgaagactcggacctggacgggtgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggatggtgttggtgacgcttgt gacaacgatgatgacaatgatggtattcctgacgacagggataactgtccgtttgtgtac aaccccaggcaatatgactatgacagagatgatgttggagatcgttgtgataactgtcct tacaacagcaaccctgaccagaccgacacagacaacaacggggaaggagacgcctgctct gtcgacattgatggagatggtattctgaatgagaaagataactgcccgtacgtctacaac gtggatcagagagacactgacctggatggtgtgggagacatgtgtgacaactgtcctctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagacaagtgtgacagc aaccaggacattgatgaggacggccaccagaataacctggacaactgcccctacatcccc aacgctaaccaggccgaccatgacaaagacggcaagggagacgcctgcgaccacgatgat gacaacgacgggatccctgatgagaaagacaactgcagactggccttcaaccctgaccag ctcgactctgatggtgatggtcgcggagatgtttgcaaagacgactttgaccaagacaac gtccctgacatctacgacgtgtgtccggagaactttgacatcagcgagacggacttcagg aagttccagatggttcccctggaccccaagggaacgtcccagatcgaccccaactgggtg gtaagacatcaaggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactcggtggacttcagtggaaccttcttcatcaatacagagaga gatgatgactacgccggctttgtgttcggctaccagtccagctctaggttctacgtggtg atgtggaagcagatcacacagacttactggagcaacaaacccaccaaggctcagggatac tcaggactgtccatcaaggtggtcaattctactactggacctggagagcacctcaggaac gctctctggcatacgggcaacaccccaggacaggtgaggactctgtggcacgaccctaag aacgttggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatgaaggattccgggagcata tacgacaagacgtatgcaggtggaagactaggtctctttgtcttctcgcaagagatggta tacttctcagacctcaagtatgaatgcagagatgcataa

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