Salmo salar (Atlantic salmon): 106571765
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Entry
106571765 CDS
T04363
Symbol
otof
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106571765 (otof)
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106571765 (otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
106571765
NCBI-ProteinID:
XP_014000673
UniProt:
A0A1S3MBV1
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All DBs
Position
ssa15:complement(49908150..50059694)
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AA seq
2061 aa
AA seq
DB search
MALLVHLKTIRDLRGKGDRIAKVTFRGLSLYTHVQENCEDEARFDETFRWPIASRVDQNE
MLEVQVFNYSKVFTNRVIGTFKMVLQKVAEEGQLEVTDTLIDDNNTAIRTTITIHIKYTT
MDGTVGVWSDGEFLDIPGDPEGTFQFETDSLLSGHSQGSGVSPGRSIHGIPTFRKAGKGV
FSAMKLGKTKSSKDDHKKDEPAILDMEDLNRKAMRLGGVGGLDPDCISLASVTAVTTNVS
NKRSKPDIKMEPSSGRPVDYQISITVVEARQLVGLNMDPVVCVEIGDDKKYTSMKESTNC
PYYNEYFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTVYSQPEHQFYH
KWATLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPLER
QWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVLFAGQRGKTSVQKSSY
EPIWNEQVVFTEMFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTMGP
AWVNMYGSTRQYTLMDEHQDLNEGLGEGVSFRARILISVAVEILDTTSTEIVSSTEVQVE
PVSNISESVTGKIEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVSKPSAAK
KKKKEGGGGGGESDEESELIQQNSSEDEADDDGDLVSVSSSPPMKPVITDRNYFHLPYFE
KKPCIYIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEIIKTETAYPERRLRGVLEEL
STGCNRFVTLANKDQNQAGRTKLDKERLKSCMREMESMGQQAKLIRSQVKRNTVRDKLKM
VQNFLHRLRFLADEPQHSIPDVFVWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKVK
AVFLRLPGKKGFGPAGWTVQAKMEMYLWLGLNKQRKDFLSGLPNGFEENKAPRTGSCLQS
LPPISLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPT
WDQLLVFDDVELFGEAGELRDDPPIIVVEVYDQDTVGKAEFIGRTFAKPITKMCDEHYGP
PRFPPQLEYYQIYRGNSTAGDLLAAFELLQIPYDDEEIRRALIAVHDFAVPQIKIGQGGR
VELPAINGPTDSDRGPILPVPMGIRPVLSRYRIEVLFWGLRDLKRVNLAQVDRPRVDIEC
AGRGVQSAPIVNFKKNPNFNTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHA
VTSLRSFIYSPPDKTQNNWASTARLMNGYMVLTNGGSQSRPSSPYSRTLPRTLSHPTGDV
IVNMDANPSVRKMDTVVKLDASSDAVIKVDVNEEAKEEKKKKKKKKKGEVEEDDETDERM
LDWWSKYFASIETLMEILRAQEAALAEAEEREEQEIAAEGADIKPDDLPVKGSKGKEKSR
DKSRNKDKKKSHHAGEGTEKRPSKPKVNELLVYNKELEAEYDNFEDWLHTFNLYRGKAGD
DDEAALDDDRIVGRFKGSMCMYKLPLSEEFTREAGFDPNMGMFQSIPHNDPINVLVRVFV
VRATDLHPADVNGKADPYVVIKLGKSELKDKENYISKQLNPVFGKAFDMEATFPMESMLT
VSVYDWDLVGTDDLIGETKIDLENRYYSKHRATCGIANNYSVHGYNMWRDPMKPSQILAK
LCKEGKLDGPHYGPGGRVKVANRIFMGATEIEDETGLKKQTDEHLALTVLKHWEEIPRVG
CKLIPEHVETRPLLHPEKPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKNFELRVII
WNTDDVVLEDDAFMTGEKMSDIYVKGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFD
YLIAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGA
KTAKQCSIGMVQNEAELTCISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLMSAEE
AEKSPVGLGRNEPDPLEKPNRPNTSLSWLLSPMHVVCILAWRQYKLHCVLLLGAVLGLLF
LGLLFFSMPSALSNKIFNIAG
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atggctcttctagtccacctaaagacgatccgggaccttcgtggaaagggggacagaatc
gccaaagtcacatttcgaggtctgtcgctctacacgcatgtgcaggaaaactgtgaggat
gaggccagatttgatgagacgttccgatggccgattgccagtagagtggatcaaaatgag
atgctggaagttcaagtgttcaactacagcaaagtcttcaccaacagagtcattggaacc
ttcaagatggttctacagaaggtggcggaggagggccagctagaggtgacagacacactc
atcgacgacaacaacaccgccatcaggaccactattaccatacacatcaagtacacgacc
atggatgggactgtgggggtttggagtgacggagaattcctggacattcctggtgacccg
gagggaacgttccagtttgagacggacagtctgctctccggacacagccaggggtcagga
gtgtcaccggggcgatccatccatggaattcccacttttaggaaagcggggaagggggta
ttctcagccatgaagctcggcaagaccaagagctccaaggatgaccacaagaaagatgag
ccagccatcctggacatggaggatctgaacaggaaggccatgcgtctgggaggggtgggg
ggtctggacccagactgcatctccctggcctccgtcactgccgtcaccactaatgtctcc
aacaagagatcaaagcctgatatcaagatggagcctagttctgggaggcctgtggattac
cagattagcatcacagtcgttgaggccaggcagctggttggccttaacatggaccctgtg
gtctgtgtggagattggggacgacaagaagtacacctccatgaaggaatccactaactgc
ccctactacaatgagtattttgtctttgacttccacgtcccaccagatgtcatgtttgac
aagatcctgaagctctcagtgatccactctaagaacctgctgcggagtggcaccttagtt
ggcactttcaagctggatgttggcacagtctactcccaacctgagcaccaattctaccac
aagtgggccacactgtctgaccctgatgacatcacggccggctgcaaaggttacatcaag
tgtgacatcgccgtggtggggaagggggacaacatcaagactccacacaaggccaacgag
acggatgaagacgacatagaagggaacctccttcttccggagggtgttcccttggagagg
cagtgggcacgattctacgtgaagatctatcgagctgagggccttcccaagatgaacacc
agcatcatggccaatgttaagaaggccttcataggggagaacagagacctggtggacccc
tacgtacaagtgctcttcgccggacagagagggaagacgtcggtccagaagagtagttat
gagccgatttggaatgagcaggtggtcttcactgagatgtttcctccgctctgcaaacgc
atgaaggtccagataagagactccgacaaagtcaatgacgtcgccataggaacacacttc
attgacctgcgaaagatcgccaatgatggtgacaaagggttcctgcccaccatgggtcca
gcctgggtcaacatgtatggctccacccgccagtatactctgatggatgagcaccaggac
ttgaatgaggggctgggggaaggcgtgtccttcagggcccgcatcctcatctccgttgcc
gtggagatcctggacaccacctccacggagattgtaagctccaccgaggtgcaggtggag
cctgtctctaacatctcagagagtgttacagggaaaatagaggaattcttcctgtttggt
tccttcctggaggccaccatgatcgacaggaagattggcgataagccaatcagcttcgag
gtcacaataggcaactacggtaaccagatagatggagtgagcaagccctcggcagctaag
aagaagaagaaagagggaggaggaggaggaggagagagtgatgaggagtcagagctgatc
cagcagaactccagtgaggacgaggcagatgatgatggggacctggtatctgtgtcctcc
tccccacccatgaaacctgtcatcacagacaggaactacttccacctgccctactttgag
aagaagccgtgtatttacatcaaaagctggtggcaggaccaaaggagaagactttacaac
tccaacatcatggacaagatcgctgacaaactggaggagggtctgaatgacgtgcaggag
atcattaagacagagacagcctatccagagcgcagactcagaggggttctggaggaactc
agcactggctgcaatcgtttcgtcactttggccaacaaggaccagaaccaggcaggcaga
accaaactggacaaagagagactcaagtcctgcatgagagagatggagagcatgggccag
caggccaagctgattcgctcccaggtgaagaggaacacagtgagagacaaactgaaaatg
gttcagaacttcctgcacaggctacgtttccttgccgacgagccccagcacagtatccca
gacgtgttcgtatggatgatgagtaacaacaagcgtatcgcctacgcccgcatcccctcc
aaagacatcctctactccatcgtagacgaggagacaggcaaggactgtggcaaggtcaaa
gctgtcttcctcaggctgcctggtaagaaggggtttggtccagcggggtggacagtgcag
gctaagatggagatgtacctgtggctgggcctgaacaaacaaaggaaggacttcctgtct
ggcctgcccaacggctttgaagagaacaaggctcccaggacaggctcttgtctgcagtct
ttgccccctatcagcctggtttataacatgaagcaggtgttccagctgagggctcacatg
taccaggccaggagtctatttgctgcagacagcagtggcctgtcagaccccttcgccagg
gtcttcttctccacacacagccaggtcactgaggtcctgagtgagactctgtgccctacg
tgggatcagctgctggtgtttgatgatgttgagctgttcggggaggccggcgagctacga
gacgacccacctatcattgtggtagaggtctacgaccaggacactgtgggcaaggcagag
ttcattggtcggacattcgctaagcccatcactaagatgtgtgacgagcactacggcccc
ccaaggttcccccctcagctagagtactaccagatctaccgtggtaactctaccgctggt
gacctactggctgccttcgagctgctacagattccctatgacgatgaggagatcaggagg
gctctgattgctgtccatgactttgcagttcctcagattaagattgggcaaggggggagg
gtggagcttcctgccatcaatggtccgacagactcagaccgtggacccatcctccctgtg
ccaatgggcatcagacctgtcctaagccgttatcgcatagaggttctgttctggggcctg
cgggacctgaagagggtgaatttggcacaggtggacagacccagggtggacatagagtgt
gcagggagaggagtccagtctgcacctatcgtgaacttcaaaaagaaccccaacttcaac
acactggtcaagtggttcgaggtggacctgccagagaacgagctgctccaccctcctctt
aacatccgggttgtggactgcagggcgtttggccgatacaccctggtgggttcccacgcc
gtcaccagcctacgaagcttcatctacagccccccagacaagacgcaaaacaactgggcc
agcacagctagactgatgaatggctacatggtcctgaccaacggggggtcccaatctcgc
ccctcctccccttactcccgcaccctgccccgcaccctctctcaccccacaggtgatgtc
atagtcaacatggatgccaacccctcagtcaggaaaatggacacggtggtcaagttagat
gcttcgtctgatgcagttattaaagttgatgtgaatgaggaggcgaaagaagagaagaaa
aagaaaaagaagaaaaagaagggagaggtggaggaggatgatgagaccgacgagagaatg
ctggactggtggtccaaatattttgcttctatagagacactgatggagatcctcagggcc
caggaggcagctctagctgaggccgaggagagggaggagcaggagatagcagcagaggga
gcagatatcaaacctgatgacctccctgtaaaaggctccaaggggaaggagaagagccga
gacaagagcaggaacaaggacaagaagaagagtcaccatgcaggagaggggacagagaaa
cgccccagcaaacccaaagtgaacgagctgctggtgtacaacaaggagttggaggcagag
tatgataactttgaggactggctccataccttcaacctgtacagagggaaggcaggggat
gacgatgaagcagccctggatgacgacaggatcgtgggcagattcaagggctccatgtgc
atgtacaagctgcctctgtctgaggagttcacccgggaggcgggcttcgaccctaacatg
ggcatgttccagagcattccacacaatgacccaatcaatgtgctggtgcgggtcttcgta
gtcagggccacagacctccatcctgctgatgtcaatgggaaagcggacccctacgtcgtc
atcaaactgggcaagtcagagctgaaggataaagagaactatatctccaaacagctcaac
cctgtctttggcaaggcatttgacatggaggctacgttccccatggagtccatgttgact
gtgtcagtgtacgactgggatctggtgggcactgatgacctcatcggtgagaccaagatc
gacctggagaaccgctactacagcaaacacagagctacctgtggcatcgctaacaactac
tctgtgcatggttacaacatgtggcgtgacccaatgaagccaagccagatcctggccaag
ctctgtaaggagggcaagctggacggaccccactacggccctgggggaagggtcaaggtc
gccaaccgtatcttcatgggtgcaacagagatcgaggatgagactggtctaaagaagcag
acagatgagcacctggccctgacggtgctgaagcactgggaggagatccctagggtgggc
tgtaaactcatcccagaacacgtcgagacaagacccctgctccatcctgagaaacctggc
atcgaacaggggcggattgagatgtgggtagacatgttccccatggacatgccagcacct
ggacccgccatcgacatatcaccacggaaaccaaagaactttgagctgcgtgttattatt
tggaacactgatgacgtagttctagaggacgatgctttcatgacaggagagaagatgtct
gacatctatgtcaaggggtggctgaaagggcagcaggaggacaaacaggacacagacgtc
cactaccactctctgacaggcgaggggaatttcaactggcgcttcgtgttcccctttgac
tacctgatagccgaggagaagattgtcatctctaagaaggagtccatgttctcctgggat
gagacagagtacaagatccctgcacgcctcactctgcaggtctgggacgctgaccacttc
tccgctgatgacttcctaggtgcgatagagctggacctgaacaggtttccccgtggggcg
aagacagccaagcagtgttccataggcatggtccagaatgaggctgagctgacctgcatt
tccatcttcaaacagaagagagtcaagggctggtggccattcgtggcccgcgacgaaaac
gatgagatggaactcacgggtaaagtggaggcggagcttcatctgatgtcggcagaggaa
gcggagaaaagtcctgttggtctgggacgcaatgagcctgaccctctggagaaaccaaat
cgtcccaataccagtctgtcgtggttgctgagcccaatgcatgtggtgtgtatcctggcc
tggaggcagtacaagctgcactgtgttctactgctgggggctgtcctgggactactgttc
ctgggcctgctcttcttctcaatgccctctgccctcagcaacaagatcttcaacatcgct
ggctga
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