Salmo salar (Atlantic salmon): 106575189
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Entry
106575189 CDS
T04363
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106575189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106575189
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
106575189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
106575189
NCBI-ProteinID:
XP_014006990
UniProt:
A0A1S3MV60
LinkDB
All DBs
Position
ssa17:8305343..8378477
Genome browser
AA seq
1522 aa
AA seq
DB search
MSRMETFAPTTTEKKGSGLDGNGFTDLPKKLSPSAVIRAPHHVFPTFHTPIPIDMRHHEG
RYHYEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFNPHMEHYLRS
IHSSPTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPGASPAEYYHLMASHRNPYGEL
LMQGAGAAAAHLPEYITPMDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTPP
LIQPPPTFSSRQSALGLSSLSPSSHNHNNGSQSKNTSGDSAVSSTVNPMITKRSKVKTEV
ECPRPLSPCSPDHLGGMLDLKEDLDKDECKHEPEMVYETNCHWEGCSKEYDTQEQLVHHI
NNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLE
NLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTDP
SSLRKHVKTVHGPEAHVTKKQRSDLPPSRPMPPKENGENETGRGMEEKMDSTSRGTEDYL
QVTSIKTENSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSSGGSMGDLTGLDDP
SGPLMDSSFSGLWSGTAGGGVGLHLRQHLGPSHIHRLEHLKKEKLKTVGDSCQWANHHPS
PPVQNTKLPPIPASGSLLERGNIGGGPGSFLSLSELCSSKVTVLNQLDHLMERRDSTTST
VSSAYISRRSSGISPCHYSRRSSDASTFSGHRHNNISSTGSYDPISTDLSRRSSDASQCG
GGGGGGGLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTPLALYRDASQGD
SSSGYSSFNPIAPSGVLRRCSGDMGGYNGRSMMPHEAPSNIPRRASDPVPRPPSLDPLSH
QSQVQRYNSMGNMQNLHPHASQPNQALSAAERRHLAPQSHQPRSDGSLQRYPYCPRPPSI
SENVAMETMAGDMSGSRNNSEEEMMVLPDDVVHYIACQGGSGESDCANGYNRQAQCGFHG
NTINPNPQQQQPFYHQQRMAVVDTNMNMNPSSAPQTMPLFCAHSPGHPQQSFPSLPSKTS
TMPVQWNEVSSGTVEALHNPSQQLPFGRSNPNLAMVQQKQNFVSFQNQNLNSNQHIAQII
HNLAHAAHQGRYIEQHKDDSRLSCVQQQSLQQQQPANANLNEPVSLGYGFNQGLGPSDAN
ANQRSSCSSMAVGGTLGMLSQNSKQQQTVHTVDTQNSRLRAQPGGSQSSQVTFKDSGVNS
SRMISQSYNIVSQVQHPIQNGVQILLQPRPPTEPKSLSRQHSGSMTMQRQNSIGNHCSNG
NNTDSNVMLYTGQIHVFEPNGNVNMQMMTSSVVDVLQCPSDSTETAMTSPGVSNQVSSTE
EPQIDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPQNSVTLPSLPLPAGGSNMA
IGDMSSLLTALAEENKFLNMMS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaatggagacctttgccccgacgaccacagagaagaaaggctctggtctggat
ggaaacggcttcactgacctcccaaagaaactctccccttcagctgtcatcagagcccct
caccacgtattcccgacgttccacacgcccatcccgattgacatgcgtcaccatgaggga
agataccactatgaaccacacaccctacatgccatgcatggtcctggactaggtggcagc
ccggtcatgtcagacatctctctgatccgtctgtccccccacgcagccggaacgggggag
tcccccttcagccccgctcacccctacttcaaccctcacatggagcactacctccgctcc
attcacagcagcccaaccctgtccatgatctctgcagcccgcggactcagccctgcagac
ttggcgcatgaacacttgaaagagcggggtctgtttgggttgccccctccccctcctgga
gccagccctgctgagtactaccacctgatggccagccatcgtaacccctacggagagctg
ctgatgcagggggctggggcggcagctgcacacctgccagaatacatcacccccatggat
gtgtcacggttctccagtcccagactgacccccaggctgaacagaaagcgagccctgtcc
atctctcctctctcggacgccagcatcgacctgcagaccatgatccgtacctcacccaac
tctctggtggcttacatcaacaactcacgctccagctctgcagccagcagctcctacgga
cacctctctgttggaggcatcagtccgtcctttaccttcccccaccacatcaaccccatg
gcctaccagcagctcctgtcccagcagagaggcctgagtgtgttcgggcacacccctcct
ctcatccagcccccacccaccttctccagtcgccagtctgccctgggtctctcctctctg
tccccctcctcacacaaccacaacaatggctcacagtcaaagaacacaagtggggactcg
gcagtgagcagtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagaggtg
gagtgtccgaggccgctgtccccatgttctccggatcatctaggggggatgctggacctg
aaggaggacttggataaagatgaatgcaagcatgagccagagatggtgtatgagacaaac
tgccactgggaaggatgttccaaggagtacgacacgcaggaacaactggttcatcacatc
aataacgaccacatccacggggagaagaaggagtttgtgtgccgctgggatgagtgttcc
agggagcagaagccctttaaggcacagtacatgctggtggttcacatgaggagacatacg
ggggagaagccacacaagtgtacctttgagggctgctgtaaggcctattctcgcctggag
aatctgaagacccacctgcgatctcacaccggggaaaaaccatatgtgtgtgaccacgag
ggatgcaacaaagccttctctaatgcctcggacagagccaagcaccagaaccgcacacac
tccaatgagaaaccctacgtgtgtaaagtccccgggtgtacgaagcgctacacggacccc
agctctctcaggaagcacgtgaagacagtccatggaccagaggcccacgtcacaaagaaa
cagcgcagcgacctgccgcccagcagacccatgccacccaaagagaatggagagaacgag
acaggccggggcatggaggagaagatggacagcacctcgagaggcacggaggactacctg
caggtcacgtctatcaagacggagaactctgtgatgtatcagtccagccctggtggtcag
tcgtcatgtagcagcgagccgtcgccacttggcagttccaccaaccatgacagtggagta
gagatggccctccacagcagcgggggaagcatgggggacctgactgggctggacgacccc
tcagggcccctcatggactcctccttctctggcctctggtctgggacagcagggggtggg
gtgggcctccacctacgtcagcacctaggccccagccacatccacagactagaacacctg
aagaaggagaaactgaagacggtgggggactcctgccagtgggccaatcatcatccatct
cctccagtccagaacaccaagctaccgcccataccagcaagcgggtcccttctggagaga
ggaaatattggtggtgggcctggatcgttcctcagcctcagtgagctgtgttccagtaag
gtgactgtcctgaaccagctggaccatctgatggagcgcagggacagcaccaccagcacc
gtctcctctgcctacatcagccggcgctcctctggcatctccccctgccactacagccgc
cgctccagcgacgcctccacgttcagtggccaccgccacaacaacatcagctccaccggc
tcctacgaccccatctctacagacctgtcccggaggtccagtgacgctagccagtgtgga
ggtggtggaggagggggagggctgcccagtcacctcagcctcacccccgcccagcactac
cacctcaaggctaaatatgcggcggctacaggcggagccccacccacacctctacccaac
atggagaggatgagtctgaagacccccttggccctctacagggatgcttcccagggagac
tcatcgtctggttactcctccttcaaccccattgcccccagtggtgttctcaggcgctgc
agcggcgatatgggaggctataacggccgcagcatgatgccccacgaagctccgtccaac
attccccgtcgggctagcgaccccgtcccccgaccgccatcgctggacccgctgtcccat
cagtctcaggtgcagcgctacaacagcatgggcaacatgcagaacctccacccacatgcc
tcccagcccaaccaggccctgtctgcagccgagcggcgccacctggcgccccagagccac
cagccgcgctccgacggcagtctgcagcgatacccttactgcccccggccgcccagcatc
tctgagaacgtggccatggagaccatggccggcgacatgagcggtagtcgcaacaacagt
gaggaggagatgatggtacttcctgatgacgtcgttcactacatcgcctgtcagggcgga
tctggagagtcagactgtgccaacgggtacaaccgacaagcacaatgtggtttccatgga
aacacaataaaccctaacccccagcagcaacagccgttttaccaccagcaaaggatggct
gtggtggacaccaatatgaatatgaacccctcgtctgcaccacaaaccatgcccctcttc
tgtgcccacagcccaggccatccgcagcagtctttcccctccttacccagtaagacgagc
accatgccggtgcagtggaacgaggtcagctcaggtactgtggaagctcttcacaaccca
agtcaacagctgccgttcggtcgaagcaacccaaacctcgccatggtccaacagaaacag
aactttgtctcgttccagaatcagaatcttaactccaaccaacacattgcacagattatc
cacaacctggctcacgcagcacatcaggggagatacatagagcagcataaggatgactcc
aggctgagctgtgtccagcaacagagcctacagcaacagcagcccgctaatgctaacctc
aatgaaccagtgagtctcgggtatgggtttaaccagggtcttggtcctagcgatgctaac
gctaaccagcggtcctcctgtagtagtatggcagttggtggcactctgggtatgttgagc
caaaacagtaaacaacaacagacagtgcacactgtagacacgcagaacagccggctgagg
gcgcagccaggggggagtcaatcgtctcaagtcacatttaaggatagcggtgtgaattct
tcgcggatgatctcacagagctataatatagtgtcccaggttcagcatcccatccaaaat
ggagttcaaatactcctccagccaagaccgcccacagaacctaagtctctaagcagacag
cattcagggtcaatgacaatgcagcggcaaaactcaattggcaatcactgcagcaatggc
aacaacacagacagcaatgttatgctctacacaggacagatacatgtgtttgagccaaac
ggaaatgtcaacatgcagatgatgacatcatcagtagtggacgttcttcaatgtccctca
gacagcactgagaccgccatgacctcaccgggagtaagcaaccaggtctccagtacagag
gagccccagattgactttgacaccatgctggatgacggggaccactccagcctgatgtca
ggcaccatcagccccagtatcctccagagtctgtcccagacctcctcgagactcaccacc
ccccagaactctgtcaccctgccctccctgcccctccctgcagggggcagcaacatggcc
atcggcgatatgagctccctgctcaccgcgcttgcagaagagaacaagttcctcaacatg
atgtcataa
DBGET
integrated database retrieval system