Salmo salar (Atlantic salmon): 106576445
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Entry
106576445 CDS
T04363
Name
(RefSeq) apoptotic protease-activating factor 1-like
KO
K02084
apoptotic protease-activating factor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04115
p53 signaling pathway
sasa04210
Apoptosis
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106576445
04115 p53 signaling pathway
106576445
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106576445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APAF1_C
NB-ARC
APAF-1-like_WHD
WD40
WD40_WDHD1_1st
CARD
WD40_Prp19
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Nup120_160
Ge1_WD40
CARD_2
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
AAA_16
NACHT
PROPPIN
WD40_like
WD40_RFWD3
nSTAND1
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
106576445
NCBI-ProteinID:
XP_014009105
UniProt:
A0A1S3N1A5
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All DBs
Position
ssa17:complement(48976899..49012329)
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AA seq
840 aa
AA seq
DB search
MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKPTRKEQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLISPEAEKSFSDGGTRYVQAVLSEG
GVPQRPVVFVSRPALVNRVREKLYRLQEPGWVTVFGMAGSGKSVLAAEAVRDHALITECF
PGGVHWLSIGQLDRSDLLVRIQSLCFRLEQQSQEKDPSSSLHRSPGSLEEAKERLRFLML
RRYPRSLLILDDIWDSSVIKAFDIQCRVLLTTRDRSLADCVSGSKSEVAVESGLEEDQAL
EILALYVNGKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFKR
IRKSSSYDYDALDQAMAASIQVLSDEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEVE
DVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSGLESLHTKVVRQYQQRYSQGP
PTSGDEECLYWFRFLTYHMAKANLTQELCSLMFSLDWVRTKAQIMGPAHLINDYVEYGAI
LDKENSEVRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRGG
LYLDWMNKSSLKSLSRLVVQPHQGSIYAACFSHDGTKIASCGSSKTLRVFKSTSGEKMLE
IQAHDDEVLCCAFSPDDRLLATCSSDRKVKVWNVECGTLMRMFEEEHEEQVNHCQFTNTR
RRLLLATCSNDKFLNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDAYLSTSSSDGTLKL
WEVSSANEWKSIDVADMFPEQREQTAVMVKCSTWSADGRTIICAARNAVFVSVEEPALPC
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggaggaaggggcgcggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgatggcgtgctgacgggg
gacgaggaggacaggatcaggagcaagcccaccaggaaagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaatgccctggtccgc
gagagctacggagacctggccagcctgctccacaacagcctgcccctgatctcccctgag
gctgagaagagcttctcagatgggggcacccgctatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacccgtggtgtttgtgagccggccagccctggtaaaccgggtcagg
gagaagctctaccgcttgcaggagcccggctgggttactgtgttcggcatggccggctcc
ggcaagtcagtcttggctgcggaggcagtccgagaccacgcactcatcacagagtgtttt
ccaggaggagtccactggctgtccataggccagctggaccggtctgacctgctggttagg
atccagtcactgtgtttccgcctggagcagcagagccaggagaaagacccctcgtcctcc
ctccaccggtctcctggctctctggaggaggccaaggagcgactacgcttcctcatgctc
cgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctctgtgatcaag
gcctttgacatccagtgtcgagtactgctcaccacccgagacagaagcctagccgactgt
gtcagcggttctaagtctgaggtggcagtggagagtggtctggaggaagatcaggccttg
gagatcctcgccctgtatgtcaacgggaaaccccagagactcccagaacaggcccgcagc
attgtccgagagtgcaaaggctcccccttggtggtgtccctaatcggggccctgctgcgg
gagttcccggaccgctgggcctactacctgcacacgctccagcagaagaagttcaagcgt
atccgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagcatc
caggtcctgtctgatgaacacagggagctttacattgacctcactgtgctggagaaggac
gtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggtggag
gacgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccggccc
tacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctctggt
ctagaaagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggtccc
cccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatggcc
aaggccaacctcacacaggagttgtgctctctgatgttctctctggactgggtcagaact
aaagctcagattatgggaccggctcatctcatcaatgactatgtggagtacggcgccata
ctggacaaagagaacagcgaggtgcggggccacttccaggagttcctgtctctgaacggc
caccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagccagac
tcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggggga
ctctaccttgactggatgaacaaaagtagtctgaagagcctgtctcgtctggtggtccag
ccccaccaggggtccatctacgctgcctgcttctcccacgacggcaccaagatcgcctcc
tgtggctccagcaagacactgcgagtgtttaagagcacctctggggagaagatgctggag
atccaagcccacgacgatgaggtgctctgctgcgccttctccccagatgaccgtctccta
gcaacctgctctagtgataggaaggtcaaggtttggaacgtggagtgtgggactctgatg
aggatgtttgaggaggaacacgaggagcaggtcaaccactgtcagttcaccaacacacgt
cgacgcctcctactggccacctgttccaacgacaagttcttgaacaccaagctgtggaac
atcaataaaccctcctcccagaacaccatgtttggtcatttggagcctgtcaatcactgc
tgtttctcccctgatgatgcctacctctccacctcttccagcgacggaaccctgaagctg
tgggaggtgtcctcagccaatgagtggaagtccatagacgtggcggacatgttcccggag
cagagagagcagactgcggtcatggtgaagtgcagcacctggtcagcagacggcaggacc
atcatctgtgctgccaggaacgcggtctttgtgagtgttgaagagccagccctcccctgc
tga
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