Salmo salar (Atlantic salmon): 106578151
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Entry
106578151 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106578151
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106578151
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106578151
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106578151
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Nup88
YVC1_C
Motif
Other DBs
NCBI-GeneID:
106578151
NCBI-ProteinID:
XP_014012253
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Position
ssa18:complement(68424835..68448612)
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AA seq
674 aa
AA seq
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MWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLIAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEFTEFVG
ATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPF
NIIPSPKSVWYLCLWVHHRLCRRGAPPADDREKHHDLQEFTERHADSLIQNQHYQEVIRS
LVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRCHFSSSSEATL
RNEGGTSDEGGSDPDLDPSLGLQEGSGAKRSKGVTFLTPTGSMEKKKKPKYGVSALVRSI
SGMEVVSMTRGEEEQEGWGEEEEKEGWEEGKEGWEEEEDEEEGKPKSNGVRREAVPSSSS
SFIFPSFPSSSTSVSLSFARTRSRLQQLSSATSNKTTDSFKRLGLLFSRKAPPLPLSLGQ
SPPSYTISDGLLRPLRGRGSYDLGSVSHVTRSEMHLNQVGHTNPVGAPPASSGRANGRDS
LLTLPLPPPCPCQSLHCASNMADSSSHLLDSSESVFEGGGGGGGGGRVLGEGWVGPCDVI
EDSTGIEDSVTTQL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatggaggttttacagagtatattcatgactggtggaacctgatggatttcgct
atgaactccctctacctggctactatatcactgaagatagtagcttatgttaagtacaac
tcatcccgtcctagagaagagtgggagatgtggcaccctaccctgatagcagaagcgttg
tttgctatagctaatatcttcagttctctacgactcatctccctgttcacggccaactcc
cacctgggacctctacagatctcattgggaaggatgctgttggacatactcaagttcctc
ttcatctactgtctggtgctgctagcgtttgccaacgggctgaatcagctgtacttctac
tatgagaccaacgcctcagatgaacccaacaactgcaagggcatccgctgtgagaaacag
aataacgctttctcaacgttattcgagaccctccagtctctgttctggtccatcttcggc
ctgttaaacctgtacgtgaccaacgttaaagctcgtcatgagttcacagagtttgttggc
gccaccatgtttggaacctataacgtcatctccctggtggttctgctcaacatgttgatc
gccatgatgaacaactcctatcaactcatcgctgaccatgcagatatagagtggaagttt
gcccggaccaagttatggatgagttattttgatgaagggggtactctgccccctcccttc
aacatcatacccagtcctaagtcagtgtggtacctctgcctgtgggttcaccatagactc
tgtaggagaggagcgccccctgctgacgacagagaaaaacatcacgacctacaagagttc
acggagcgtcatgcagacagcctgatacagaatcagcattatcaggaagtgatccgtagc
ctggtgaagaggtacgtggcggccatgatacgcagcgccaagacggacgagggactgacc
gaggagaactttaaggagttaaagcaggacatctccagtttccgttatgaggtgttagat
ctccttggtaaccgccggccccccagatgccacttctcctccagcagtgaagccacgctt
cgaaatgagggaggaaccagcgacgaaggggggtctgaccctgaccttgacccctccctg
gggttgcaggaggggagtggagccaagaggtcaaagggcgtgacctttctgaccccgaca
ggaagcatggagaagaagaagaagcctaaatatggcgtctccgccctggtccggagtatt
tcaggaatggaagtggtatccatgacgaggggggaagaggagcaggaaggatggggggag
gaggaagagaaggagggatgggaggaagggaaggagggatgggaggaagaagaagatgag
gaagagggtaaaccaaagagcaacggggtgaggagagaagccgttccgtcctcttcttct
tcttttatcttcccttcattcccttcttcctccacctccgtctccttatccttcgctcgc
actcggagtcgtctccagcagttgtcgtcggcgacgtccaataagacaacagactccttt
aagcgcctcggcttactgttctcacgcaaagccccaccccttcccctctccctcggccaa
tctcctccttcctacaccatctctgacggcttgctccgtcccctgagaggtcgcgggtca
tatgacctcggttcggtgagtcatgtgacccgcagcgagatgcacctgaaccaggtcgga
catactaacccggtcggagcccctcctgcttcctccggacgagccaatgggagggactct
ctgctaaccttgcccctcccacctccctgtccctgccaatccctgcactgtgcttccaat
atggccgactcgagctcccacctcctggactccagcgagagcgtcttcgagggaggagga
ggaggaggaggagggggcagggttttgggagagggatgggtggggccttgtgatgtcata
gaggactccaccggcatcgaagactctgtcactacgcaactgtag
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