Salmo salar (Atlantic salmon): 106578308
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Entry
106578308 CDS
T04363
Name
(RefSeq) putative pleckstrin homology domain-containing family M member 1P
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04140
Autophagy - animal
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106578308
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106578308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106578308
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106578308
Membrane trafficking [BR:
sasa04131
]
SNARE
SNARE associated proteins
Others
106578308
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
106578308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
106578308
NCBI-ProteinID:
XP_014012465
UniProt:
A0A1S3NB32
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All DBs
Position
ssa19:2570762..2597456
Genome browser
AA seq
1070 aa
AA seq
DB search
MLATQTPDTGPEAEDVKQWIKEKLAWSLKALQKRYVMTDAMVTSEDGDANLLCSSLEAVF
IHGIKSKYVRSKAGGHGRKGGSRGPLPQPVFWSLLKTVTHRDVITELEKLSFVGTDVGRC
RAWLRLALNHGLMECYLASLFREGSNLQAHYQPSALLLDPEEREVLLSYIQGLASLVFNL
SYKSAVLNEWTTTPLALAGLCPTTQADAVDLPSLTKHKDSWDTVSLSSGGSDTVEVQHGG
AGVLGRVTGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDL
EISARLENDVNAKRPLKDDLADFRESANSSQDSMHEDSYVSTPGADHLSENTAFSGSDGE
TQVPFTPLTGSSNPASVGSDQEEPSTKTHVPSEVHSHTEVLSSHSDCVEKTATTPHLPVT
ETPQEKKTEDSAKSTSAPSAHTNLCLTTSVQSRRVSTDSITHSHSWISEDDIYKPHLEEL
VDPDESLLGSGPARVNGLTSPPSEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGA
VGMWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDARVASAEGRFDLAFPGKRLHLR
AANHDEAEDWVDRITEAVSKCRPLHRLDDHSEVLQPTDSFVILEEPPKSSPSSPSVPTSP
ERGGTAVEQEQQPPLELDWTRPTVPESDAIKEAVLYLSQDAEARNWTPLVFSLSLETLNG
FRVQDGQKVLCCSHPIEGIRDVVPDVSLGGPAFFRVVTARDTLKLRAKSPEEARAWRGLI
RGALDSYLESGENGEPNSPGLATGAGGNIHRLVQHRLKGDGVLLAHLYTVPTEKGLDLQG
FKCAGCPKPVGVSRGKARLCEFSGKYYCDACHQGDAIAIPSRMVHNWDITPREVSRQALE
LLAHVEHEPLLNLHLLNPNLWEHVEAMAQAHCLRQRLQLVGNYLLTCRSGPCKNIQTRLG
LRTYLLESSHLYSVMDLQQIAEGTYVAYLNMLIRFASNHVQQCDLCTQRGYICQICHASD
IIFPFQFDTTARCKECKAMFHATCKAQSSSCPRCLRLQRYLESDLQDCSV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagaccccagatacggggccagaggcggaagacgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctctgcagaagcgctatgtgatgaccgatgcc
atggtaaccagcgaggatggtgacgccaacctgctgtgctcttctctggaggccgtcttt
atccacggcatcaagagcaaatatgtccgctccaaggccggaggacatggcaggaaaggg
ggttcccggggacccctcccccaacctgtgttctggagccttctcaagacggtcactcac
cgtgacgtgatcacggagctggagaagctgagctttgtgggtacggacgtgggtcgttgc
cgggcctggctgcggctggccctcaaccacggcctgatggagtgctacttggcctccctg
ttccgtgagggctccaacctgcaggcccactaccagccctccgccctgctcctggaccct
gaggagcgtgaagtgctgctcagttatatccagggcctggcctccctggtcttcaacctt
tcgtacaagtcagccgtgctcaacgagtggaccaccaccccactggctctggccggcctc
tgccccaccacccaggccgacgctgtcgaccttcccagtctcaccaaacacaaggattct
tgggatacggtgtcactgtcgtccggcgggtcggatacggttgaagtgcagcatgggggg
gcaggggtgctggggagggtgactgggggggtctcagggggtaggacccctctgaattct
tctaatttgagcctggacaccacagggtcatctcagctctcctccagcctaagttcagac
agtctgctgcagggtcatgaccccaagagcccagacaaggagccctggccatgtgacctg
gagatctctgccagactggagaacgatgtcaatgccaagaggcctcttaaagatgatctg
gcagacttcagggagagtgccaactccagtcaggactccatgcacgaggattcgtacgtt
tccactccgggtgcagaccacctctcagagaatacggccttcagcggctctgacggcgag
acccaggtgccattcacacccctcactggctcctctaaccctgcttcagtggggtcagac
caggaggagccgtccactaagacccatgtcccttccgaagtgcactcgcacactgaagtg
ctctccagtcacagtgactgtgtagagaaaacagcgacaactcctcacctgcctgtcaca
gagacgccacaggagaaaaagacggaagattctgctaagagcacctctgcgccttcagcc
cacacaaacctatgccttactaccagtgtgcaaagcaggagggtgtctacagactcaatc
acacattcccactcctggatctctgaggatgacatctataagccacaccttgaggaactg
gttgaccccgatgagtctttactagggtctggcccagctcgtgtgaatggattgacctct
cccccttcagagcccgagactccccagtctccccccagcgtggttcaccgcaggcagata
ggcctgtccaaccctttccgtgggctgctgaagctgggccatctggagcggcggggcgct
gtgggcatgtggcgggactactactgcgagctctcgcccttcgagttccgcctctacctg
aacgcagaggagcgcacctgctgtgacaactgctccctgctgcgttgcgaagacgcccgt
gtcgcctcggccgagggccgcttcgacctggccttcccagggaagaggctccacctgcgg
gcagccaaccacgacgaggcagaggactgggtggaccgcatcacagaggccgtcagcaag
tgccgcccgttgcaccgccttgacgaccattcagaggtgctgcagcccactgatagcttt
gtcatcctggaagagcccccaaaatcttccccttcgtccccctccgtacccaccagtccc
gagcgagggggtactgcggttgagcaggagcaacagccgccacttgagctagactggacc
cgtcccacagtccctgagtcagacgccattaaggaggctgtgctgtacctatcccaggac
gcagaggctcgcaactggactcccctggtcttctccctctccttggagactctcaacggc
ttccgggtacaggatgggcaaaaggtgctgtgctgctcccaccccatcgaggggatacgg
gacgtggtcccagacgtttctctggggggaccggccttctttagggtcgtaacggccaga
gatacgctcaagctgagggccaagagccctgaggaggcgcgtgcctggaggggcctcatc
aggggagccctggactcctacctggagagtggcgagaacggggagcctaatagccccggg
ttagccactggggcaggggggaacatccacagactggtgcagcatagactgaagggggat
ggggtgctgctggcccatctatatacagtgcccacagagaaggggctggaccttcagggc
ttcaagtgtgcaggttgtccaaagccggtgggggtctcccggggaaaagccagactgtgc
gagttctcagggaagtactattgcgacgcttgtcaccagggtgacgccatcgccataccc
tcccgcatggtgcataactgggacatcacgcctcgcgaggtctccagacaggccctcgaa
ctgctggctcacgttgaacatgagcccctgctcaaccttcaccttttgaaccctaacctg
tgggagcatgttgaggccatggcccaggcacactgtctcagacagaggctgcagcttgta
ggaaactacctgctcacctgccgcagtgggccatgcaagaatattcagaccagactgggc
ctaaggacatatctgttagaatcaagccatctctacagtgtcatggacttacaacagata
gcggagggaacatatgtggcctacttgaatatgttgatccggtttgcctccaaccacgtt
caacaatgtgacctttgcacccagaggggctacatctgccagatctgtcatgccagtgac
atcatcttccccttccagttcgacaccactgccaggtgtaaagagtgtaaggcaatgttt
cacgcaacctgcaaggcccagtcgtcgtcctgtccacgatgcctgcgtcttcagaggtac
ctcgagagcgatctgcaggactgctctgtttga
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