Salmo salar (Atlantic salmon): 106578947 Help Entry 106578947         CDS       T04363                                  Name (RefSeq) protocadherin-15-like   KO K16500   protocadherin-15 Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:sasa00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     106578947  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sasa03037]     106578947    04515 Cell adhesion molecules [BR:sasa04515]     106578947 Cilium and associated proteins [BR:sasa03037]  Primary cilia and associated proteins   USH complex and associated proteins    106578947 Cell adhesion molecules [BR:sasa04515]  Cadherins   Protocadherins    106578947 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Ig_Cad99C_N Cadherin_CELSR2_9th Cadherin_2 CDH23_a-b Big_9 Motif Other DBs NCBI-GeneID:  106578947 NCBI-ProteinID:  XP_014013727 UniProt:  A0A1S3NE91 LinkDB All DBs Position ssa19:44765430..45081788 Genome browser AA seq 1724 aa AA seqDB search MQKRSWHFKWLGIGLLLLATCCLSQDTDDWQYDECKLSRTGPPATIVAIDEESPNGTLLV ENMQIQGRVEDPGRTISLSLRDNYNHWVILDPVRQRLYLNSTGRALDRDPPSYIHSIVVQ VQCTNELVGTVILHEVRIVVRDRNDNAPRFQQPRYYVAINELTPVGTTIFSGFTGNNGAR DIDDGPNGQIEYIIQYNPTDPTANRTFDIPLTLSGSVVLRERLNYEEITRYLVLIQANDR APYPNERRTATTTLTVDVLDGDDLGPMFLPCSLVDNTRDCSPLTYRVHILELTDPSKVNP VNVTPIIQAVDQDRNIQPPSQRPGILYSILIGKPETYVDFFSLNRTTAELQLLKPLIRDL NNRFDLVIKAEQDNGHPLPAFANLHIEVLDENNQSPFFLETTYQGFIIESAPVGTTVFTD ASLTTALGINVLDNDIEKTKDPMLQISLDNYNTIFTVTPSGITRYLTLLKPVDREEQHSY TFTMVASDGVQESTPVTINITVIDANDNTPTFPNTSYSVNVYTDMQPGETILQLTALDAD GGPNGLVTYKILAGDQGHFIINNRSGVITVVPGVSLAMGRSYTLTVKAVDNGPGSQRRSS ITTVYIEVLPPNNQSPPRFPRFLYSLEVSEAMRIGATLLSLQATDRERDVITYSIQNGDP HHLFELSQMSGLLVLRKPLDRETEDRYTLFVTASDGRPDGTSTATVNIVVTDVNDNDPVF DPLLPQNLTVTEEEANCFVGHVKATDPDVGVNGQVRYRLVNHADLFRINSNGTISTAVPL DREVKGQYDLIVEAEDGAVEDPRRTTLTLSVTVLDVDDNSPVFSQPSYTVNLPENSPKNT VILQFTAKDADLDSNITFRIRTQEARQLFAVNPVTGELSVLQTLDFETLAASDHTYTFVV EALDNEESMPPGLATVTVKITDMNDYSPVFSQVVYRGMVAPNAVKGTVVATVQAEDLDPP GTPASRVRYRLDLDEDPYSGSIFDVDEITGSVITRVNLNEEPNLVFSMVIVAYDDGEPMK VNKTLVVITVLQPSIIPVFTQEEYRFPPVSEKAKVGKLVGVILAAAVNQTIVYSIVEGNE GGVFRLNNNTGVISTAKPLDYETNGSYSLRVEADSMGLAESNLRAPSKTNTARVFIDVLD ENDHSPVFTKPLYLGGVAEDAKTFTSVLQVQALDKDTGNYSSMQYRLVIPPTTNGKDGFV IEPYTGVIKTAIMYRNMRRSYFKFEVVATDNYGQGGLSNKAEVVVSVVNLLDMQVVVSNV APTVVEQNKDKLLRVLERYVQDQIPGAKVVVESIGPRRFGDGFEQEDYSKSDLMVYAIDP LTNRAVSRQELFKFLDGKLLDINKEFQPYLGRGGRILEIRSPVVVTSVKKAVQTVGYTEG ALLALAVIIILCCIPAILIVIITYRQFKERQAECAKTARIQMTLPTGKSVVAATNNLYEE LGDSTMRGYGHHEQQQLLRPSLLRPEELSIESGIDPGQDYYTQDYYNYDHGYELPQYGSR RKLISPTGLYDEYGEVIVEDDGSYYYCSPQESDGEYGRKKRIKLVVDREYETSSTGEDSA PEPQRNRLSNLTNHSNVNGSVYLAQNGSVIRTRRAAHSNNIKVNSPVRLGKHFKKLDKLA VTHEERLPLNSPVATTSSADKNLNTQPSSGSLASSTTGAESIASKSNIAKARSERTWNAE EQESTVDNENVREPLESQSDRTYSDEEELWMGPWNNLHIPMTKL NT seq 5175 nt NT seq  +upstreamnt  +downstreamnt atgcagaagaggtcatggcacttcaaatggttagggataggacttctgctgttagctact tgttgcctgtctcaagacacagatgactggcagtatgatgaatgcaaactctccagaact ggtccacccgccaccattgttgccatagatgaagagagccccaatggaacacttttggtt gagaatatgcaaatccaaggccgagtggaagacccaggcagaaccatctctctctccctc cgagacaactacaaccactgggtaatactggacccggtcagacagaggctgtacctcaac agcaccggcagggccctcgaccgagatcccccgtcctacatccattccattgttgtccag gtccagtgcaccaatgagctggtcgggaccgtcattttacacgaggtgcgcatcgtggtg agggatcgcaatgacaacgcaccccgattccagcagcctcgctactatgtcgccataaat gagttgaccccagttggcaccaccatcttctccggcttcactgggaataatggagccagg gacattgatgacggccctaacggacagattgaatacatcatccagtacaacccaactgac ccgacggccaacaggacgtttgacatccctctcaccctctccggctcggtggtcctgagg gagaggctcaactacgaggagatcacccgctatctggttctcatccaggccaatgaccgt gccccgtaccccaacgaacggcgcactgccaccaccaccctgactgtagacgtgctggat ggggatgacctgggacctatgttcctgccctgctctctggtcgacaacacacgtgactgc agccccctcacctaccgggtccacatcctggagctcactgacccaagcaaagtgaaccct gtcaacgtgacgcccatcattcaggccgtggaccaggacaggaacatccagcctccgtca cagaggccaggcatcctctactccatcctcattggcaagcctgagacgtacgtggacttc ttctccctgaacagaaccaccgccgagctgcagctcctcaaaccgctcatcagggacctg aacaatagatttgacttggtaatcaaggcagagcaggacaacggccaccccctgcctgca tttgctaacctccacatcgaggttctggatgagaacaaccagtcaccattcttcctggag accacgtaccagggcttcatcatcgagtcagcaccagtgggtaccacagtgttcaccgac gccagcctcaccaccgctctggggatcaatgttctggacaacgacattgagaagacgaaa gatcccatgctgcagatatccttggacaactacaacacaatcttcacagtgacaccttca gggattacgcgctacctgacactgctgaagcctgtggaccgtgaagagcagcacagctac acattcacaatggtggcttctgatggagttcaggagagtactccagtgaccattaatatc acagtgatcgatgccaacgacaacacaccgaccttccccaacacctcctacagtgtcaat gtttacacagatatgcagcctggggaaacaatattacagctgacggctctggatgctgac gggggtcccaatgggcttgtgacctacaagatcctggcgggggatcaaggacacttcatc ataaataaccgctcgggagtgatcaccgtggtgcctggagtctccctggccatgggacgc tcctacacgctgactgtgaaggctgtggataacggtccggggtcccagaggaggagctcc atcaccaccgtgtacattgaggtgctcccccccaacaaccagagccccccacgctttccc cgctttctctacagcctggaggtcagcgaggccatgaggatcggagccacactcctcagc ctgcaggcaacggaccgtgaaagagacgtcatcacctacagcatccagaacggggatccc caccacctctttgagctctcgcagatgtcagggctgttggtcctgaggaaaccactggac agggagacagaggatcgctacaccctctttgtaactgcctcagatggccgtccagacggg acctccactgccactgtgaatattgtggtcactgatgtcaacgataatgaccctgtcttc gatcctctcctgccccaaaacttaacggttacagaggaggaggccaactgttttgtgggc catgtaaaggccacagatccagacgtgggggttaatggccaggtgcgctaccgactggtc aaccacgccgacctcttcaggatcaactccaacggcaccatctccaccgcagtgcctttg gatcgagaggttaagggtcagtatgacctcatcgtggaggcggaggacggagcggtggag gaccccaggagaaccacactgactctgtcggtgaccgtgctggatgtggatgataacagt ccggtgttctcacaaccatcctatacggtcaatctgccggagaatagtcctaagaacaca gtcatcctgcagtttaccgccaaagacgctgacctggactctaacatcaccttccgtatc cggacccaggaggctagacaactttttgccgtcaatccagtgactggagagctctctgtg ctgcagacgctggactttgagaccctggcagcctcggaccatacctacaccttcgtggtg gaagcactggacaatgaagagagcatgcccccaggcctggccactgtcactgtaaagata acggatatgaatgactactctccagtgttcagccaggtggtgtacaggggcatggtagct cccaacgcagtcaaggggactgtggtcgccacggtacaggcagaggacctagaccctcct ggcacccctgccagccgtgtacgttacagactggacctggatgaggacccttacagtggc agcatctttgacgtggatgaaatcacaggcagcgtcatcacacgagtcaacctcaatgaa gagcccaatctagtgtttagtatggttattgttgcctatgacgacggggagccaatgaaa gtcaacaagaccctggtggttatcactgtcctgcaaccctccatcataccagttttcacc caggaggaatacagatttccccctgtgagtgagaaggctaaggtggggaagctggtcggt gtcatactggctgcagctgtcaatcaaacgattgtctactccatagtggagggcaacgag ggaggtgtgttcaggctcaacaacaacaccggggtgatctctacggccaagccgctggac tatgagaccaacggcagctacagcctcagagtggaggctgactccatggggttggccgag tccaatctccgagcgccctccaagaccaacacagcgagggtgttcattgatgttctggat gagaatgatcactctcctgtctttaccaaacccttgtacctgggaggagtggccgaggac gccaagacattcacttctgtactacaagtccaggccctggacaaggacacagggaattac agctccatgcagtacaggctcgttatcccccccaccaccaacggcaaggacggctttgtc atcgagccctacaccggtgtcatcaagactgccattatgtacaggaacatgcgccggtct tacttcaagttcgaagtggtcgccactgacaattatggccaggggggactgagcaacaag gcagaggtggtggtatccgtggtgaatctgctggatatgcaggtggtggtctccaacgtt gctcctacagtggtggaacaaaacaaggacaagctcctccgggtcctggagcgctatgtg caggaccagattccaggggccaaagtggtggtggagtccataggaccgcggcggtttggc gacggcttcgagcaggaggactactccaagtcagacctgatggtgtatgctatcgaccct ctgaccaacagggccgtttcacgccaagagctgttcaagtttctggatgggaagctgctg gacatcaacaaggagttccagccgtacctgggccgaggagggaggatcctggagatacgc tcccctgtcgtggtgaccagcgtgaagaaggccgtgcagaccgtgggctacacagagggg gcgctgctcgccctcgccgtcatcatcatcctctgctgcatccccgccatcctcatcgtc atcatcacctacaggcaattcaaagagagacaggcggagtgtgctaaaactgcccggata caaatgaccctccctactggcaaatcagtggttgctgccaccaacaacctgtatgaagag ctgggggacagcactatgcgcgggtatggacatcatgagcaacagcagttgctcaggccc tctcttctgagaccggaggagctctctattgagtctggtatcgatcctggccaggactat tacacccaggattattataattatgaccatgggtatgagctgcctcagtatggcagtcgc aggaagttgatatcgccgacaggcctgtatgatgagtacggagaggtgattgtggaagac gatgggagctactactattgcagtccacaggagtcagatggagagtacgggaggaagaag cggatcaagctggtggtggacagggagtatgagaccagttccacgggggaggacagtgct ccagaaccccaaaggaaccgtctgtccaatctgaccaaccacagcaacgtcaacggcagc gtgtacctggcacagaacggctcagtcatacgcacccgccgggccgcccactcaaacaac atcaaggtcaactccccggtgcgcctgggcaagcactttaagaaactagacaaactggcg gtgactcacgaggagagactgccgctcaacagccccgtggcgaccacgtcctcggccgac aagaacctaaacacccagccctccagcggctccctggcctccagcaccacgggcgccgag agcattgcgtccaagtccaacatcgccaaggccaggagcgagagaacgtggaatgcggag gagcaggagtcaacagtggacaatgagaacgtgagagaacctttagagtctcagagcgat cgcacgtattccgatgaggaggagctatggatggggccctggaacaatctgcacatacca atgacaaaactgtga

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