Salmo salar (Atlantic salmon): 106579418
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Entry
106579418 CDS
T04363
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106579418
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106579418
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
DUF7557
Motif
Other DBs
NCBI-GeneID:
106579418
NCBI-ProteinID:
XP_014014782
UniProt:
A0A1S3NHB0
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Position
ssa19:63471603..63591907
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AA seq
1309 aa
AA seq
DB search
MSDTEGEGGGEMSKTEKDQVGMLQKISWIPKIIKKRVCTTFVEDSFSNGRLCQCGGTRDT
HDSVALGDYFSTAIVSHWDSSQHSSEYPTDAFGELEFAGASKRHSKFLRLSWDTPPSIVY
TLMTAHWGLPPPNLVVSVVSGEGRAKVKTWVREVLRQGLVKASQSTGAWILTGGLREGVG
RCVGEAVRDHATAASSVSLNKVVALGIAPWGLVHNRQQLVNPQGSFPARYYFQNTSRDSC
CLDNNYQAFLLVDDGSVGRRGGEAGFRARLEDYISHQRTGIWGSGSIDIPVLCMLISGET
TMLERLDLSLRNSMPWLVLAGSGGVADLVSDVLESLSSAPPVLSSTEGEGEAGPTVDLKD
RVAERVRKHFPSETEMDKLVERVLSIYLNRDLITVYHGEQEGPDDFDTVLLKALVGASKQ
RVSSEASPYTEELKLAVTWNRVDIAKSELFNGDIHWRYQDLEDSMTDALVNDKPQFVRLF
TENGLNILDYLTYGRLESLYRSVADSSLAYVLLQCRLGERQGITGSQTMLLDVSPAKGSG
GPPRGRRPANKFSLFEVSRVLEDLMGDVCQPFYHSPLGLENISSQRKALKRVSKLLRGDC
AYQDKRCLFPWASLFVWAVLQNRNDMAVFFWEMAGESVLSALSGCKILRELSKLESETET
KLAMKELAQRFENLAHDVFSKCYQSSESRSFTLLIRKSPVWGGTTCLKMGMAADARLFFS
HDGVQSLLSQIWWGDMKRSTEVWKLLLTFFCPVLMYTQLISFRELEEPGKPDEVAQGRDN
DSLYGETIFSFSDIKHIEHHTQGPNSPRYPLKGTPNTPPKRPFVVSRWRQFWFAPVTSFL
GNVLMYFLFLLLFAYVLLVDFKPPPPRGPASAECVLYFWVFTIVCEEIRETFLVGSMMWR
QRMRKYVQDVWNKCDLTAIILFIIGLTCRMFQWSYEFGRAVLCVDYMVFTLHLIHIFAIH
KQLGPKIIIVGKMMKDIFFFLFFLGVWLMAYGVANQALLYSYDPRPAWIFRRVFYRPYLH
IFGQVPVEEIDVRKEWDTECTDNVTLIEGGAEPCRSHYANWLVIVLLVIYLLVTNILLIN
LLIAMFSYTFSKVQGQSDTYWKFQRYNLIVEYHSRPSLAPPFIILSHVHLFIKRYIRKVP
SVKILHFVLELTGKAANRLMTWEAIQKENFLTAQSKIQRGSDSERLKRMSVKVDSVLKQM
AETRDHDRRLRALESESHSLPPPLPSDPVFVYMPSHSGSLKGTVDMLFLSTLAASLSQQV
STVANCFCWHFTFSVFVEVVYFIFKRFPKDNSWNLGNGWKIHCRRTVFL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacggaaggagaaggcggcggcgaaatgtcaaagaccgagaaagatcaggtg
ggaatgcttcaaaaaattagctggatacccaaaattatcaagaaacgagtgtgcacaacg
ttcgtagaggattctttcagtaatggcaggctgtgtcagtgtgggggtacgcgggacacc
catgattcagtggctctgggggactatttcagcacagccatcgtcagccactgggacagc
tcccagcattcctctgagtaccccaccgacgcctttggagagctggagttcgccggcgcc
agcaagagacacagcaaattcctgcgtctctcgtgggacacccctccttccatcgtctac
accctgatgacggcccactgggggctacctccgcccaacctggtggtgtcagtggtgagc
ggggaggggagggcaaaggtcaagacgtgggtacgggaggtcctgaggcagggattggtc
aaagcctcccagagcacaggagcgtggatacttactggaggcctgcgtgagggtgtcggg
aggtgtgtaggggaagcggtaagggaccatgccaccgctgcctcttctgtctccctgaac
aaggtggtggctctgggcatcgctccctggggcctggtccacaaccgccagcagctggtc
aatccgcagggtagcttccctgctaggtactacttccagaacacgtcccgtgactcatgt
tgcctggacaacaactaccaggccttccttctggtggatgatgggagtgtaggccgcaga
gggggcgaggcaggcttcagggcccggctggaggactatatttcccatcagcgcacaggc
atctggggcagtggaagcattgacatccccgtcctgtgcatgctgatatcaggagagaca
accatgctggagcggttggatctctctctgaggaactccatgccctggctggtgctggcg
gggtcgggtggtgtggccgacctcgtcagtgacgtcctggagagcctatcgtctgcgccc
cctgtcctgtcctccaccgagggggagggggaagcgggacctactgtggaccttaaagac
agagtggccgagagggttaggaagcactttccgtctgaaacggagatggacaaactggta
gaacgggttctgagcatctacctgaacagggatctgatcactgtctaccacggagagcag
gagggaccagatgactttgacacggtcttgctcaaagccttggttggagcgagtaagcag
cgcgtgtcaagtgaagccagcccctacactgaggagctgaagctggcggttacctggaac
agagtggacatcgccaagagtgagctcttcaatggagacatccactggaggtaccaggac
ttggaggattccatgacggacgcgttggtcaatgacaagccacaattcgtgcgcctcttc
accgagaacggactcaacatcctggactacctgacttatgggcggctggagagcctctac
cgctcggtggccgacagctctctagcctacgtcctgctgcagtgccgcctaggggagcgc
caaggtataacaggctcgcagaccatgctgctggatgtctctcctgccaaagggtctggt
gggccgccacggggccggcggcctgcgaataagttcagtttatttgaggtgtcgagagtc
ctggaggacttgatgggggatgtgtgtcagccattttaccactcgccactgggactggag
aacatctcctcccagagaaaggctctcaagcgtgtgagtaagttgttgcggggcgactgt
gcgtaccaggacaagcgctgtctctttccctgggctagtctctttgtctgggctgtgctg
cagaaccgcaacgacatggccgtcttcttctgggagatggcaggcgagtcggtcctcagt
gctctgagcggctgtaagatcctacgggagctgtccaagctggagagcgagacagagacc
aagctggccatgaaggagctagcacagaggttcgagaacctggctcacgatgtattcagt
aagtgttaccagagcagtgagagtcgctccttcaccctgctgatcaggaagtctcccgta
tggggagggaccacctgtctaaagatgggcatggctgccgacgcccgcctcttcttcagc
cacgatggagtacagtctctcctgtctcagatctggtggggggatatgaagaggagcacg
gaggtgtggaaactcctcctcaccttcttctgtcccgttctgatgtacacccagctcatc
tccttcagggaattggaggagccggggaagcctgatgaggttgcacagggtagagacaat
gacagcctttatggagaaacaattttctccttctctgacatcaagcacattgaacatcat
acacagggtcctaatagtcccagatatcctctaaaaggcacgcccaacaccccacctaaa
cgtccttttgtggtatcccgatggcggcagttttggttcgcacccgtcacttccttttta
ggcaacgttctgatgtacttcctgttccttctgctctttgcctacgtgctattggtggac
tttaagccgccacccccgcgaggccccgctagcgccgagtgtgtgttgtacttctgggtg
ttcaccatcgtctgtgaggagatccgagagacgttcttagtgggtagcatgatgtggcgt
cagaggatgaggaagtacgtccaggacgtttggaacaagtgtgacctcaccgccatcata
ctcttcatcataggcctcacctgcagaatgttccagtggtcctatgagtttgggcgagca
gtcctgtgtgtggactacatggtcttcacacttcatctcatccacatcttcgccattcac
aaacaactggggccaaagatcatcatcgtcggcaagatgatgaaggatatcttcttcttc
ctcttcttcctgggggtgtggcttatggcatatggggtggccaatcaagcactgctgtac
tcctatgacccccgccccgcctggatcttccggcgcgtgttctacaggccgtacctgcac
atatttggacaggtcccagtggaggaaatagatgtgaggaaggagtgggacacggagtgc
actgacaatgtgacgctgatcgagggaggcgcggagccctgcaggagccattatgctaac
tggctagtgattgtcttactggtcatctacctactggtcactaacatcctgctcatcaac
ctactcatcgccatgttcagttacacattctccaaggtgcagggccagagcgacacctac
tggaagttccagcgctacaacctgattgtggagtaccactcccggccctcccttgctccc
cccttcattatcctctcccacgttcacctattcatcaagagatacatccgtaaggtaccc
tcggtcaagatcctccattttgtattggagctgacggggaaagcagctaacaggttaatg
acatgggaggccattcagaaggagaacttcctgacagcccagagcaagatccagagaggg
agcgactcagagaggctcaaacggatgtcagtcaaggtggacagtgtactgaaacagatg
gctgagacaagggatcatgatcgcagactgagagctctggaatcggagagccattcccta
cctcctcctcttccatctgatcctgtctttgtttacatgccaagccattcagggtcactg
aaaggaacagttgatatgctgtttctttccactttggctgcttctttatcacaacaagtc
tccactgttgccaattgtttttgttggcattttacattttctgtattcgttgaggttgtg
tatttcatttttaaaaggttcccgaaagacaacagttggaacctgggaaatggctggaaa
atacactgtcgaagaactgtttttttatga
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