Salmo salar (Atlantic salmon): 106579932
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Entry
106579932 CDS
T04363
Name
(RefSeq) lysine-specific demethylase 2B-like
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106579932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106579932
04121 Ubiquitin system [BR:
sasa04121
]
106579932
03036 Chromosome and associated proteins [BR:
sasa03036
]
106579932
Enzymes [BR:
sasa01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
106579932
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
106579932
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
106579932
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
106579932
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
106579932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
PHD
Viral_cys_rich
Motif
Other DBs
NCBI-GeneID:
106579932
NCBI-ProteinID:
XP_014015810
UniProt:
A0A1S3NKM4
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All DBs
Position
ssa20:complement(19728308..19740318)
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AA seq
774 aa
AA seq
DB search
MALSLSADEEDYDSESEQQHAANRPKPKMGTSAAVKLPSNRSASGARRRRTRCRKCEACL
RTECGDCHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCGEAGKEDSLEEEEDR
FNIMLMECSICSEIVHPNCLKVKDASGVVNDELPNCWECPKCNYAGKTGKVCKQKRGPGF
KYASNLPGSLLREQKVVKDEGESTSTVKRKPERDETPRHRPEEWEALHRQPPVLSPSTLP
RPRPEDKLRKKRKLFDDDYEEDFDVRKKGKSDGHLFLNQIKTEEEEVDEEEKASLYRRGL
ERRGRLGDTEEEDGDDEDTKTSLPRPPLKAPVLDSDQSHCSSPWAGPSSEGGSEPQEKGP
RPKACRKRRLPNKELSKELSKALNQEIQKTEDCLANENRQPLKVEPESENEEPKRSFRNG
SDLGGERPHHWTKEMNGTPWELRHFYPSQITPLGFNRSSPGTRPLPPRSPPKCVQMERHV
IRPPPISPPPDRLPLVDGKTHAVQREVWVKIFGHVTHKELCVCMRVCKTWNRWCCDKRLW
TIIDLNRCKSITPLMLSGIIRRQPLSLDLSWTNISKKQLSWLINRLPGLRVLLLSGCSWV
AVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVVDLRLAG
LDVTDASLRLIIRHMPVLSQLDLSYCNHVNDQSVNLLTAAGTTTRDSLTEINLSVCNRVT
DHSLTFFKRCGSICHIDLRYCKQVTKTACEQFIAEMSVSVQFGLKEDKLLQKLG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtcactgagtgcagatgaagaggattacgattcagaatctgaacagcagcat
gcagccaaccggccaaagcccaagatggggacgtcagcagcggtcaagctgccgtccaat
cgcagtgcgtctggcgccagacgcaggagaacacgctgccgaaagtgtgaggcgtgcctc
cgaaccgagtgtggagactgtcacttctgtaaagacatgaagaagtttggaggaccaggg
cgcatgaagcagtcctgtatcatgaggcagtgcattgcacctgtcctgccccacacagct
gtgtgtgttgtgtgtggagaagcaggtaaggaggactccctggaggaagaggaggacagg
ttcaacatcatgctcatggagtgctccatctgcagtgagattgttcaccccaactgctta
aaggttaaagatgcctctggcgtggtgaatgatgaacttcccaactgttgggaatgtccc
aaatgcaactacgctgggaaaacaggaaaagtctgcaagcaaaaaaggggaccagggttc
aagtacgcgtccaacctccctggctctctgctgagggagcagaaggtggtcaaggatgag
ggcgagtctacgtctacagtcaagaggaagcctgagagggatgagactcccagacacaga
cctgaggaatgggaggcccttcacagacaaccccctgtcctgtcccccagcaccctgcct
cggcccagacctgaggacaaactgaggaagaagagaaagctcttcgacgatgactacgaa
gaggactttgatgtgaggaagaagggaaagtcagatggacatctgttccttaatcagatc
aagactgaagaggaggaggtggatgaagaggagaaggcctctctgtaccggcgaggcctg
gagaggagagggcgtttaggagataccgaggaggaggacggggatgacgaggacacaaag
acgagcctgcccaggcctcctcttaaagctcctgttctagacagtgaccagtctcactgc
agctctccatgggctggccccagtagcgaggggggcagtgaaccccaggagaagggccca
cgtcccaaagcgtgccgcaaacgccgattaccaaacaaagagctgagcaaagagctgagc
aaagcactgaaccaggagatccagaagaccgaggactgccttgccaatgagaaccgccag
cccctgaaggtggagccagagagtgagaatgaagagccaaagaggagcttccgcaatggc
agtgacctaggaggagagcggccacaccactggaccaaggaaatgaacggcactccctgg
gagctgcgccacttctaccccagccaaatcactcctctgggcttcaacaggagctcccct
ggcacccggcccctgcccccacgctccccacccaagtgtgtccaaatggagcgccacgta
atccggccgccccccatcagccccccgccggacagactgcccctggtggatgggaaaacc
cacgcggtgcagcgagaggtctgggtgaagatcttcggacacgtcacacacaaggagctg
tgtgtctgcatgcgtgtctgcaagacatggaaccgatggtgctgtgataaaagactgtgg
accataatcgatctgaaccgctgtaaatctatcactccccttatgctgagtggcatcatc
cgcagacagcccctctcactggacctcagctggaccaacatctccaagaagcaactaagc
tggcttataaaccgcttaccaggtctgcgcgtgttgctgctctcaggttgctcgtgggtg
gctgtgtctgccctctgcacctctagctgccctctgctgcgcaccctcgatgtgcagtgg
gtggaggggctcaaagatgcccagatgagggacctgctctcgcctccgaccgacaacaga
ccaggccagttggacaaccgttgtaagctgaggaacgttgtggacttgcgtctggccgga
ctggacgtcacagacgcctctctgcgtctgattatcagacatatgccggtactttcacaa
ctggacctgagctactgcaaccacgtcaacgaccagtcggtcaacctgctgacggccgca
gggaccacaaccagagattccctcacagagatcaacctatcagtttgtaatagggtgaca
gaccattcccttaccttcttcaagcgctgtgggagcatctgtcacattgacctacgctac
tgcaaacaggtgaccaagacggcctgtgaacagttcatagcagagatgtctgtaagtgta
cagtttggcctcaaagaggacaaattactgcagaaactcggctag
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