Salmo salar (Atlantic salmon): 106580838
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Entry
106580838 CDS
T04363
Name
(RefSeq) homeobox protein otx5-A-like
KO
K09337
cone-rod homeobox protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106580838
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106580838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
106580838
NCBI-ProteinID:
XP_014017790
UniProt:
A0A1S3NRC4
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Position
ssa20:complement(49566605..49570743)
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AA seq
292 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLSGPGMDLLHSAVGYPNIPRKQRRERTTFTRAQLDILEALFSKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQQSTGQSKPRPPKKKASPAREAN
SEASANTNGSYSPAPLPLGTAITPSSSSANATVSIWSPASISPLPDPLSVSTTPCMQRSS
AYPMTYTQAPAYTQSYAGSSSYFTGLDCSSYLSPMHSQLSATGGALSPITSMGGHLSQSP
SLSSQGYTAASLGFGAVDCLDYKDQAASWKLNFNAADCLDYKDQNSWKFQVL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcagcctcattacgccgtgaacgggttaactctgtctggcccg
ggcatggatctactacactctgccgtcggatacccaaacatccccagaaagcagcgtcgg
gaaaggaccacgtttacgcgcgcgcagttggacatcctggaggcactgttttccaagacg
cgctaccccgacatcttcatgagagaagaagtggcccttaagatcaacctaccagagtct
cgtgtacaggtatggtttaagaaccgccgtgctaaatgccgccagcaggcgcagcagagc
acgggccagtctaaacctcgtccacccaagaagaaggcctctccagcccgggaggccaac
tctgaggccagtgccaacaccaacgggtcctacagtccagcaccacttccccttggcacc
gccatcacccccagctccagcagtgccaacgcgaccgtgtccatttggagccctgcctcc
atctccccgctgccagatccactgtcagtctccaccacgccctgcatgcagcgctcctct
gcctaccccatgacctacacccaggccccggcctacacccagagctacgcaggctcatcc
tcttacttcactggcctggactgcagctcctacctgtcccccatgcactcacagctctcc
gccacagggggtgccctcagccccatcacctctatgggcgggcacctaagccagtccccc
tctctgtcctcacagggctacacagccgcctcgctgggcttcggggccgtcgactgcctg
gactacaaggaccaagctgcctcctggaagctcaacttcaacgcagctgactgcctggac
tacaaagaccagaactcctggaagttccaggtcttgtag
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