Salmo salar (Atlantic salmon): 106581586
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Entry
106581586 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106581586
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106581586
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
106581586
NCBI-ProteinID:
XP_014019187
UniProt:
A0A1S3NUV6
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Position
ssa20:84502528..84558831
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AA seq
860 aa
AA seq
DB search
MLRQTLAKTRRLGMRGPAYMFSARSASLSLTEERFLDAAEYGNIPEVRKMLEELPELNVN
CVDYMGQNALQLAVANEHLEVTELLLNKDNLARIGDALLLAISKGYVRIVEAILSHRAFA
DTQRLVNSPGQADTRDDFFSYDEDGTRFSHDITPIILASHCHEYEVVHILLRKDARIERP
HDYLCKCGTCSYHQKHDSFSHSRSRINAYKGLASPAYMSLSSKDPVMAALELSNELAVLA
NIEKEFKKDYKELSVQCEDFVVGLLDLCRNTEEVEAILNGDVDASENYEPHGRPSFIRLK
LAIKYDLKKFIAHPNCQQQLMSIWYENLSGLRQQTNVVKFLVVLGVAVGLPVLAVLYWVA
PTSKLGKIMRGPFLKFVAHAASFTIFLGLLVMNAADRFQGTKLLPNMTVQDHPAQLFRMK
TTPFTWMEILIISWVIGMVWAECKEIWSQGAREYLSETWNLLDFGMLSLFVTSFVTRFMA
FWHAYAAQSYVNKHYTDLSNITLVPEMEYYRLARNNWVPSDPQIISEGLYSIAVVLSFSR
IAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMFGMFNLYSYYLGAKQNDAFT
TIEESFKTLFWAIFGLSEVKSVKINNGHKFIENIGYILYGVYNVIMVIVLLNMLIAMINN
SFQEIEDDADVEWKFARAKLWFSYFEEGGTLPVPFNLVPSPKSIIALVLGLRDLILKALN
RHKRCHNEDTELNKVNLTIVLTLTHLSLSLSLSLTHLSLSLSLSLSLSLSLSLSLSLIAI
EPVDDKIMKRLIKRYVIKAQINKDSDEVNEGELKEIKHDICSLRYELLEQKNHNMEELAE
LIRRLGEKIPAEQQRHQGQI
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgctacgacagacgctggccaagacacggaggctgggcatgcgggggccggcctacatg
ttcagcgcacgctcagccagcctatccctgaccgaggagcgcttcctggacgcggcggag
tacggcaacatccccgaggtccgcaagatgctggaggaacttcctgaactcaacgtcaac
tgtgtggactacatgggccagaatgcattacagctggcggtggccaatgagcatctagag
gttacggagctgttactgaataaggataatctggccaggataggagatgctctactgttg
gctatcagtaaaggatacgtcaggatagtggaggccatactgagtcacagggccttcgca
gacacacagaggctcgtcaacagtcctggccaagcagacacacgagacgacttcttctcc
tatgacgaggatggtacacggttctctcatgacatcacccccatcatcctggcctctcac
tgccatgagtacgaggtagtacacatcctcctgaggaaggacgcccgtatcgagaggcca
cacgactacctctgtaagtgtggcacctgcagctaccaccagaagcatgactcgttcagc
cactctcggtcccgtatcaacgcctataaagggctggccagcccggcctacatgtctctc
tcgagcaaagaccctgtgatggctgccctggagctgagcaacgagctggctgtcctggct
aacatcgagaaggagtttaagaaagattacaaggaactgtccgtgcaatgtgaagacttt
gtggtcggactgctggacctgtgccgtaacacggaggaggtggaggccatcttgaatggg
gacgttgatgccagtgaaaactatgagccacatggaagaccaagctttataagactaaag
ctcgcaataaaatatgacctgaagaagttcatcgcccatccaaactgtcagcagcagctc
atgtctatctggtacgagaacctgtctggactgagacagcagaccaacgttgtcaagttt
ctggtagttctgggtgtagctgttggacttcctgtcctggctgtgctctactgggtggca
ccgactagcaagctggggaagataatgcgtggtcccttcctgaagttcgtggcccatgca
gcttccttcaccatcttcctgggcctgctggtgatgaatgcagcggatcgcttccagggt
accaagctgctccctaacatgaccgtacaggaccaccccgctcagctgttcaggatgaag
accacccccttcacctggatggagatactcatcatatcctgggtcataggaatggtctgg
gctgagtgtaaggagatttggtcccagggggctcgggaatatctttcggagacatggaat
cttctagactttggaatgctgagcctattcgtgacatccttcgtcactagatttatggcg
ttctggcatgcgtatgcagcacagagctacgtcaacaagcactataccgacctgtctaac
attaccctggtcccagagatggagtactacagactggcccgtaataactgggttccctcg
gacccccagatcatctcagagggtctgtattccatcgctgtggtactgagcttctctcgc
atcgcctacatcctcccagctaatgagagtttcgggcccctgcagatatctctgggacgc
acggtgaaagatatcttcaagttcatggtgatcttcatcatggtttttgtggccttcatg
tttggaatgttcaatctctactcatactacctgggagccaagcagaacgacgccttcacc
acgattgaggaaagcttcaagacgttattctgggccatatttggcctgtccgaagtcaag
tcagtgaagatcaacaatggccataagtttatcgagaatataggctatatcctttatggg
gtttataacgtcatcatggtgatcgtcctgctcaacatgctcattgccatgatcaataac
tccttccaggaaatagaggatgacgctgatgtagagtggaagtttgcccgggctaagcta
tggttctcctactttgaggaaggtgggacattacctgtcccctttaacctggttcccagt
cccaagtccatcattgccctggtgctggggctaagagacctcattctgaaggctctcaac
agacacaagcgctgtcacaatgaagatacagagctcaataaggtgaacctcacaatcgtg
ctcactctcacacacctctctctctctctctctctctctctcacacacctctctctctct
ctctctctctctctctctctctctctctctctctctctctctctctctctcatagcaatt
gagcctgtggatgacaagataatgaaacgcctcatcaagagatatgtgataaaagcacag
atcaataaagacagtgacgaagtgaatgaaggagagctgaaggagattaaacatgacatc
tgtagtttacgctacgaactcctggagcagaagaaccacaatatggaggagttggctgag
ctgatccggagactgggagagaagatacctgcagagcagcagaggcatcagggtcagata
tag
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