Salmo salar (Atlantic salmon): 106581882
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Entry
106581882 CDS
T04363
Name
(RefSeq) U8 snoRNA-decapping enzyme-like
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00230
Purine metabolism
sasa01100
Metabolic pathways
sasa01232
Nucleotide metabolism
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
106581882
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106581882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106581882
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
106581882
3.6.1.64 inosine diphosphate phosphatase
106581882
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
106581882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
Motif
Other DBs
NCBI-GeneID:
106581882
NCBI-ProteinID:
XP_014019796
UniProt:
A0A1S3NX21
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Position
ssa21:complement(19872718..19879663)
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AA seq
199 aa
AA seq
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MASGQLSREEALACVGCRHACHILLYADTEAQLFEEIPIRHIVLMQMRFDGLLGFPGGLV
EPSEESLEEGLSRELWEELGFSLSVTVEDHVSSCHNPSSSSSHPITHFYARRMEEKEIRE
VEKAAASTATDHGHEVMGMVRVPLYTLKGGGGGLPSFLSHSFIGNSRSQLEDALVRFGLV
TPEELQTALKHAAQRRKQS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggccagtggacagctgtctagagaagaggcgttggcgtgtgtggggtgcagacatgcg
tgtcacatattgctctatgcagacacagaagctcagctgttcgaagaaatccccatcaga
cacattgtactgatgcagatgcgttttgatggtctgttgggtttccctggcggtctcgtt
gagccgtccgaagaatccctagaggagggcctgagcagggaactgtgggaggagctgggc
ttctcactgtcagtcaccgtggaggaccatgtgtcttcctgccacaacccttcctcctct
tcctctcaccccattactcacttctatgcccggagaatggaagagaaagagatcagggag
gttgaaaaggcagctgctagcacagcaacagaccatggccatgaggtgatggggatggtc
cgagttcctctctacacactaaagggaggaggaggagggctcccctcattcttgtcccac
tcctttattgggaactctcgctctcagctggaggacgctctagtgcgcttcggcctggtg
acacccgaggagctacagacagcactcaaacacgcagcgcagaggagaaaacaatcttag
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