Salmo salar (Atlantic salmon): 106583775
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Entry
106583775 CDS
T04363
Symbol
rnf123
Name
(RefSeq) ring finger protein 123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106583775 (rnf123)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106583775 (rnf123)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106583775 (rnf123)
Multi subunit type E3
KPC complex
106583775 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
106583775
NCBI-ProteinID:
XP_014023817
UniProt:
A0A1S3P881
LinkDB
All DBs
Position
ssa22:57882177..58132311
Genome browser
AA seq
1316 aa
AA seq
DB search
MSSKGGGSTALTRRNYRLASDTDKPKVTGIVNEKLLSDYLHHVFPASHLPRPPLASLRKP
LGFQDLGAHLERLLTEGEPTEDTRDQPVDGCLGPLTVVLDHTSGFEGLLFVDDDLLGVIG
HSNFSSIRATTCVYRGKWAYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNR
VRKWNVTTTNYGKSWAAGDIVSCLIDLDEGTITFCLNGQSLGTAFSNIKMGPGVAYFPAI
SLSFKESVAFNFGSRPLRYPVEGYLPLQNPPTADLLRAHKLLGYIKTVLSTTLDTQEEKV
LEKDSACWSLHGEPTTLVTLAHIFNYFAPLMCKVYLVEDVLMNFLLGILEGGGSVDEHPL
IQQLLDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKS
RKYLLSNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTRFDKEGKESKDESAEER
MRRRAYERGCQRLKKRIEVVEELQVQILKLMLNNKDKGTGEASRYIFLNKFRKFLQENAS
NRGHPTALCPPEYMVCFLHRLITAVRSYWDEGKMKNPGCVSSDEAYVPPQLFYNGKVDYF
DLQRLGGLLSHLKKTLKDDLASKANILMDPAEIQATSMDDLDEEEESGSAQRPFGAVAMG
GALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLAPPEKVKVRTLAVEQRTEEDIEGSH
GNDGLLLGRPLEEPDHPITEKSLLEILDGIVMMYNLSVHQQLGKMVVVSDDVHEYAVALK
DTEEKIARCPARRPDILEELQKSQKVFAEKLNHLSRRLAWINATIYCKDKMLDVYWLLRV
CILTIQHADNTGTLFAFTPEFYLNVAMNSYSSLKNYFSPSNCMDQLPGYEDTLTQLAAIL
AKHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEEQRVSMMRNLLAPYEQRPWA
QTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDTNLPSLQKPCPSLLLQRHMAELLSLDKD
MAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLRV
LEMTVTLVPQIFLDWTRPSAELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLESVD
HYPILVAVTGILVRILVDCERQGVSRAASVLLSDPCFQLHSIQHLLGEGETSLAAAVLPQ
TPTVHPGDPAAAPAERKHFSLHAYTDYIHEEEEQKVEQMLAFLTIESKQAAASTAPTSEE
DLCPICYAHSISAVFKPCSHKSCKACINQHLMNNKDCFFCKATITGVEDYSKPSAS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaaggggggaggaagcacagccctgacccgacgaaactacagactggcctcc
gacacagacaagcccaaagtcacaggtattgtgaatgagaaattactgagcgactaccta
caccatgtatttcctgcctctcaccttccacgccccccgctggcttccctcaggaaacct
ctgggcttccaggacctgggggctcatctggagaggctgctaactgagggagagcctact
gaggacaccagagatcagccagtggatggttgtctaggtcctctgaccgtggtcctggat
cacaccagtggcttcgagggcctcctgtttgtggatgatgatctgctgggggtcataggt
catagcaatttcagttccattagagctactacctgtgtatacagagggaaatgggcgtac
gaggtgctgatctcgtcacagggcctgatgcagataggatggtgcactctgaactgcagg
ttcaaccaggaggaaggtgtgggtgacactccagactcgtacgcttacgatggaaaccga
gtcaggaagtggaacgtaacgaccactaactatggcaagtcatgggcagctggagacata
gtgagctgtttgatagaccttgacgagggaaccatcacattctgtctgaatggccagtca
ctgggcacagcgttcagtaacattaagatgggtccaggtgtagcctatttccccgcgatc
agcctgtcctttaaagagtccgtggcgttcaacttcggcagtcgccccctcagataccct
gtagagggatacctgcccctccagaatcctccaactgcagacctgctcagggctcacaaa
ctgctaggttatatcaagacagtcctgtctaccaccttagacacacaggaggagaaggtg
ctggagaaagacagtgcctgttggagcctacatggagaacccaccacccttgtgactctg
gcacacatcttcaactactttgccccacttatgtgtaaggtgtatctagtagaagatgtg
ctgatgaacttcctactgggtatactggaggggggtggctcagtggacgaacaccctctc
atccagcagcttctggacctcttctggcttctcatggaggactacgaggtgaacgagtgt
ctgaagcagctgatgatgtcactgctgagggcctatagattctcccccatcatcccagac
ttgggcttccagattcactacctacgtttgacgacagctattctgcgccatgagaagtcc
aggaagtatctgctcagcaacgttctgtttgatgttttgcgctcagtggtgttcttctac
attaagactcctctgagggtgaaggaggcgggactagaggaactcatccctaccacctgg
tggcccacacgcttcgacaaagagggaaaggagtctaaagatgagagtgcagaggagagg
atgaggcgccgggcctacgagagaggttgtcagaggcttaagaagaggatcgaggtggtg
gaggagttgcaggttcagatcctgaagttgatgcttaacaacaaggacaaaggaacgggt
gaagcatcgcggtacatatttctgaataagttcaggaagtttctacaggagaacgccagc
aacagagggcaccccacagcgctgtgtcctccagaatacatggtgtgtttcctgcatcgt
ctcatcacagccgtgaggagctactgggacgaagggaagatgaagaaccctggctgtgtc
agcagcgacgaggcctatgttccgcctcagctcttctacaatgggaaggtggactacttt
gacctgcagcgacttggaggccttctctctcatctgaagaaaaccctcaaagatgacctg
gcctccaaagccaacatcctcatggacccagctgagatccaggctacctctatggatgat
ttggatgaggaggaggagagtggctcagctcagaggccttttggagcggtggctatgggt
ggtgccctggccagacccagctggctcagttctcccactctgggccgagccaatcgcttc
ctgagtaccgctgctgtcagcctcatgactcccaggcgacccctggcacccccggagaaa
gttaaagttcgcaccctggccgtggagcagaggacggaggaggacatcgagggaagccat
ggtaacgatggcctgttgctggggcgaccgttggaagagcccgaccatccaatcacagag
aagtctctgctggagattttggatgggattgtgatgatgtacaacctgagtgttcatcaa
cagctgggcaagatggtggtggtgtcagatgacgtccatgaatacgctgtggctctgaag
gacacagaggagaagatcgcacgctgcccagcaagaagaccagacatcttggaggagctg
cagaagagtcagaaggtatttgctgagaagctgaatcacctcagtaggagactggcctgg
atcaacgctaccatctactgtaaggataagatgctggatgtgtactggctactgagggtg
tgtatactcaccatccagcacgctgacaacacaggaacgttgttcgccttcaccccagag
ttctacctcaacgtggccatgaacagctatagctctctcaagaactacttcagcccctcc
aactgcatggaccaactgccaggctacgaggacaccctcactcaactcgctgctatcctc
gctaagcactttgctgacccgcgcatcgttggaacagacatcaaagactccctcatgcag
gctctggccagttacgtgtgttacccacaatccctcagagctgtggagaggatcccagag
gaacaacgtgtgtccatgatgagaaacctgctggccccttatgaacagaggccctgggct
cagaccaactggatcctggtacgactgtggaggggttgtgggtttgggtacaggtacaca
cggctgcctcatctgctcaaaaccaaaccagaggataccaaccttcccagtctgcagaag
ccgtgcccatccctcctgctgcagagacacatggcggagctgctctctctggataaagac
atggctgcctccttcctcaattctgttctcaaccagctcaactgggccttttcagagttt
ataggcatgatccaggagattcagcaggcggctgaacgtcctgagcgtaactttgtggac
acaaggcagctgaaggtgtgcgctacgtgtttcgacctttccgtcagcctgctgcgggtc
ctagagatgacagtcaccctggtcccacagatcttcctggactggacacgcccctccgct
gaactgctgctcagacgattggctcagcttctgaaccaggtgttaaacagagtgaccgca
gagaggaacctgttcgaccgtgtggtcaacctccgtctcccaggcctagagagtgtcgac
cactatcccatcctagtggctgtaacagggattctggtgagaatcctggtggactgtgag
agacaaggggtgtcgcgtgcggcttcagtgctgttgtctgatccgtgctttcagctgcac
tccatccagcacctcctgggggaaggagagacctctctggctgcagcagtgctcccccaa
accccaacagtacacccaggagaccctgctgcagcccccgcagaacgtaaacacttctcc
ttgcacgcctatacagactacatccacgaggaggaagagcagaaggtggaacagatgtta
gccttcctgactatagagtcaaagcaagccgccgccagtacagcacccaccagtgaggaa
gacctgtgtcctatctgctatgcacactccatctctgctgtcttcaaaccctgctctcac
aagtcctgcaaagcgtgtataaatcagcacctgatgaacaacaaggactgtttcttctgc
aaggccaccatcactggagtggaggactacagcaagccttctgcatcttaa
DBGET
integrated database retrieval system