Salmo salar (Atlantic salmon): 106588438
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Entry
106588438 CDS
T04363
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106588438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106588438
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
106588438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
106588438
NCBI-ProteinID:
XP_014032914
UniProt:
A0A1S3Q0C7
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Position
ssa27:8923659..8934157
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AA seq
917 aa
AA seq
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MMETDGDQNQGSTNGTTPSGVSSRPSQMNSMSLYERQAVQALQALQRQPNAAQYFQQLML
QQQINNAQLQNLAAVQQATLAASRQSSPPANSTSQTTSTTVTSMNVTTSGGGAVTSTRAI
GPGSSATSTISQSVLLGGNAAGQGQMYLRRMEDTHPSQVNRSLRSPLSSQLIFMPGSTAT
TAMATVTQQPQTQQQQQREDTPTSSSNQSDNDQVQNLALRCVGSPKGVGVKTETPERGET
ATYSLIQSSHQQFNQSTPQSTTKPTQLQQSHIKIPTYIQSSNTNLSSLNLKTGNHHSNAS
SSPSTSQLLLSGPNFGRGGAITTVTSAATATHILVPTSNAPTQSHSYQVAAATIKPNVSA
QTLVVQPLQKSTVNDKGGHGNGPVPIQPKTQQGLRVPLQLPSRNPPPILPAPPANNQTSA
AQPPPHIPVQIVGARQSSIGSPQALALVQARNTCSQDGATLLSSSSRASILTMVASITSR
EGGVINRRTDLKSLQSAQEALPLAHISHVHAQANQNQSPGLKPNPNCTLASSISSQSQTA
ISPPTLSHSSHTLPLPLVEASSTVVAANGESMCSQPPQGKSMKRKSESVAANDEDGPPPP
HLLPMSEHSPALSSSAMEAGPGPLSPSPSPSLSPALSMSRMGGGQGERAPPQQAVVKPHV
LTHLIEGFVIQEGAEPFPVSGPVKEPAGEDLAMDNLDTSQPETVNTPTGSAQTTVPVLKC
EYCKSFAPARQFRGTKRFCSLTCSKRYNVSCSQHFRLRQGGHLSHSDEDGVLRRRVPHRT
SSEIASAKIAGRPLPVKCRSESSRSEDVSSCGEEEDDPMSLSPASSSSCHQPPPTLRLEG
SEVPHFLPVSPAQWSVEEVSQFISSLQGCEELADHFLSQEIDGQALLLLREEHLMSTMNI
KLGPALKICAHINNLRD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagatggggaccaaaaccagggctctaccaatggaaccactccatcaggg
gtgagctcccgcccctctcaaatgaactccatgtccctgtacgagagacaggctgtgcag
gcccttcaggcactgcagaggcagcccaacgcggcgcagtacttccagcagctgatgctg
cagcaacagatcaacaatgcccagctacaaaacctggctgcagtacaacaggccaccctt
gctgccagtcgtcagtccagccctcccgccaacagcacctctcagaccacaagcacaaca
gtcacatctatgaatgtaaccacttctgggggaggggccgtaaccagcacccgcgctata
ggcccaggctcctccgcgacatccactataagccaatcagtgctgctgggcggaaacgcg
gcaggacagggacagatgtatctgagacgaatggaggacactcatcccagccaggtgaac
cggtctctgaggtctcccctctcctcccagctcatctttatgcctggcagcacagcaacc
actgccatggcaacagtcacccagcagccacagactcagcagcagcaacaacgggaagat
acacctacttcctccagcaaccaatcagacaatgaccaggtacagaacctggctctgcga
tgtgtcggcagtcccaagggggtcggggtcaagactgaaaccccagagaggggtgaaaca
gcgacctactcccttatccagtcatctcaccagcagttcaaccagtccactccacagtct
accactaaaccaacccaactgcaacagtcccacatcaagatccccacctacatccagagc
tccaacaccaacctgtcctctctcaacctcaagacgggcaaccaccactccaacgcctcc
tcctcaccctccacctcacagctcctcctctccggacccaactttggccggggcggggct
atcaccacggtaacctccgccgccacggcgacgcacattctggtgcccacctccaatgcg
cccacccagtcccacagttaccaggtggctgctgccaccatcaagcccaatgttagtgct
caaacgctggtggttcagcctctgcagaaaagcactgttaacgacaaaggaggccacggg
aacggtcccgttccaatccagccgaaaactcaacagggtctccgtgtgcccctgcaactg
ccatcccgcaacccgcctcccatcctccctgcaccccccgccaacaatcagactagtgcc
gcccagcccccgccgcacatcccagtccagatagtaggagccaggcagagctccatagga
agcccccaggctttggccttggtccaggcccggaacacctgctcccaggatggagctact
cttctgagtagttccagcagagccagcattctcaccatggtggcttccatcacttccaga
gagggaggggtgataaaccgacggacggatttaaagagccttcaatcagcccaggaagcc
ctcccattggcccacatctctcacgtgcacgcgcaagccaatcagaatcagagccctggg
ctgaagccaaatccaaattgcaccttggccagcagcatctcctctcagtcccagacagcc
atctctcctcccaccctctcccattcctcccacactttacccctgcctttggttgaggcg
agcagcaccgtagtggctgccaatggagagtctatgtgttctcagcctccccagggtaag
tcgatgaagaggaaatccgagtcagtcgcagccaatgacgaagatggtccccctcctccc
caccttcttccaatgagtgaacactcccctgccctctcctcctccgccatggaagcaggc
cctggtccactttctccctccccctctccctctctttcccctgctctctcgatgtcccgt
atggggggtggccagggggagagagccccccctcaacaggctgtggtcaaaccccacgtc
ctcacccacctcatagagggcttcgtcatccaggagggagctgaacctttccctgtgagt
gggccagtgaaggagccagctggcgaagatttggccatggacaatctagacactagtcag
cctgagactgtgaatacacctacaggttcggctcagaccacagtcccagtgctgaagtgt
gagtactgcaaaagcttcgccccggccagacagtttagagggaccaagcgcttctgctcc
ttgacctgttccaagaggtataatgtgagctgcagccagcacttccgcctgcgacagggg
ggtcacctctcccactctgacgaggacggggtcctgaggaggagggttccccacaggacc
agctccgaaatcgccagtgccaaaatagccgggagacccttaccagtcaagtgccgctcc
gagtccagccgatcggaggacgtctccagctgcggggaggaagaggacgaccccatgtcc
ctctccccggcctcctcttcttcctgccaccagcctccgcccacactccgattggagggc
tcggaggtgccccacttcctgcccgtcagccccgcccagtggagtgtggaggaagtgtct
cagttcatatcatcactgcaaggctgtgaggagctggcggaccatttcctgtcacaggag
attgacggacaggccctgctgctactccgagaggagcatctcatgtccaccatgaacatc
aagctcgggcccgccctcaagatctgtgcccacatcaacaacctgagagactga
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