Salmo salar (Atlantic salmon): 106589058
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Entry
106589058 CDS
T04363
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04060
Cytokine-cytokine receptor interaction
sasa04150
mTOR signaling pathway
sasa04210
Apoptosis
sasa04217
Necroptosis
sasa04350
TGF-beta signaling pathway
sasa04620
Toll-like receptor signaling pathway
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
sasa04625
C-type lectin receptor signaling pathway
sasa04920
Adipocytokine signaling pathway
sasa05132
Salmonella infection
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106589058
04350 TGF-beta signaling pathway
106589058
04150 mTOR signaling pathway
106589058
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
106589058
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106589058
04217 Necroptosis
106589058
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106589058
04621 NOD-like receptor signaling pathway
106589058
04622 RIG-I-like receptor signaling pathway
106589058
04625 C-type lectin receptor signaling pathway
106589058
09152 Endocrine system
04920 Adipocytokine signaling pathway
106589058
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106589058
09171 Infectious disease: bacterial
05132 Salmonella infection
106589058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sasa04052
]
106589058
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106589058
Cytokines and neuropeptides [BR:
sasa04052
]
Cytokines
Tumor necrosis fators
106589058
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Cytokines
106589058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Nramp
Motif
Other DBs
NCBI-GeneID:
106589058
NCBI-ProteinID:
XP_014034205
UniProt:
A0A0U4XLS0
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All DBs
Position
ssa27:complement(37219822..37223172)
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AA seq
244 aa
AA seq
DB search
MEGDCSRVMVDMESGPVYPATTVTLVREKSSHQWRLCGALLAIALFVSAALFITWHAKKQ
DQVEEVDELQHTLRQLSGNIKAAIHLEGEYNSSGKYKTTVEWTDSVGQVFSQGGLKLNNN
EIVIPQTGLYFVYSQVSFHVSCKANPKHPNNQEMVHLSNTVKRWSPSYGSADSKEYLPLL
NSVRTVCKKSSNSEASEGKWYNAVYMGAVFNLEKGDLLRTVTENRLLPHLESGAGKNFFG
VFAL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgattgcagcagagtgatggtagacatggagagtggccctgtatacccagca
acgaccgtgaccctggtacgggaaaagtcctcacaccagtggaggctgtgtggtgccctg
ctggccattgcactgtttgtctcagctgcgcttttcattacctggcacgccaagaaacaa
gatcaggtcgaggaagttgatgaacttcagcatacattgagacaactctctggaaacata
aaggctgccattcatttagaaggtgaatacaacagcagtggaaaatacaagaccacagtg
gagtggacagacagtgtgggccaggtattctcacaggggggtcttaaactcaacaacaac
gagattgtgatcccccagacgggcctatacttcgtctatagccaggtctctttccacgtc
agctgcaaggccaacccaaagcaccctaacaaccaggagatggttcacctgagtaacaca
gtcaagcgctggtccccaagctacggcagcgctgacagcaaggagtacctgccgctgctc
aactccgtacgcaccgtgtgtaagaagtcgtccaacagcgaggcgagcgaaggaaagtgg
tataatgcagtgtacatgggagcagtgttcaacctggagaaaggagacctgctccggaca
gtcacagagaacaggcttctgccacatctggagagtggcgctgggaagaacttttttggc
gtgttcgccttgtga
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