Salmo salar (Atlantic salmon): 106589372
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Entry
106589372 CDS
T04363
Symbol
lgi1
Name
(RefSeq) leucine rich glioma inactivated 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
106589372 (lgi1)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
Motif
Other DBs
NCBI-GeneID:
106589372
NCBI-ProteinID:
XP_014034732
UniProt:
A0A1S3Q465
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Position
ssa28:6342106..6356310
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AA seq
544 aa
AA seq
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MGYGNKTLKECTVLLCVATILLLAESRRVKQPRCPASCTCTKDNALCENIRSVPHSFPPD
VFSLSFLKSGFTEITGGSFLHSPALHLLLFTANTFDSIDEDAFLGLPHLEYLFIENNKIA
SISKYAFRGLKAVIHLSLAYNNLGTLPKDVFKGMDALVKVDLKGNNLECDCKLKWLVEWI
HTTNAMVDQIPCSGPPLFQGKLINDLVPESFDCITAEFASYQPLMFESISVESFTFGMDT
FVVFAQPFTGTCSFLEWDHVETVFRAYDSIQSTSTVVCKPMVIDNQLFIFVAQLFGGSHI
YKRDISANKFIKIQDIDILKIRKPNDIETFLIDGESFFVIADSSKAGYTTVYKWNGYGFY
SHQSLHLWYRDTDVEYLEISGKPHLILASSSQRPVVYQWSKSLKQFDRRTDIPEMEDVFA
VKHFKVKNELFICLTRFIGDSKVMRWDGAMFKEVQTMPSRGSMVFQPVSIGNWQYAILGS
DYSLTQVYQWDLKRGQFVHFQDLNIQAPRAFSLVSIDNREFLLASSFRGKTQIYEHLMID
LSNN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggatatggaaacaaaaccctgaaagaatgcacggtcttgctttgcgtcgccaccatc
ctgcttttagcggagagcagaagagtgaagcaacctagatgccccgcatcttgtacgtgc
accaaagataatgcattgtgtgaaaatataagatcggtccctcacagctttccacctgat
gtcttttccttatcttttctcaaatcaggattcaccgaaatcactggaggaagcttctta
cactctccagcgctacatcttctcctattcactgccaatacatttgactcaattgatgag
gacgcattcctaggtctaccacatctggagtacctgtttatcgaaaacaacaaaattgca
tcaatatcaaaatatgcattccggggcctaaaagcagttatacacctgagcctggcctat
aataacctgggtacattacccaaagatgttttcaagggcatggatgctttggttaaagtg
gatctgaaagggaacaacctggaatgtgactgcaaactaaagtggctggtggagtggatc
cataccaccaatgcgatggttgatcagatcccctgcagtgggcccccgcttttccaaggg
aaactgatcaatgaccttgtgcccgagtcttttgactgcataactgcagagtttgcctct
tatcagccactgatgtttgagtccatttcagtggagtcctttacctttggcatggataca
tttgttgtgtttgcccagccctttactggaacgtgcagcttcctggaatgggatcacgtt
gaaactgttttcagagcctatgacagcattcaaagtacatccactgtggtatgcaaaccc
atggtgattgataatcagctgttcatcttcgtagcccagctctttggtggctctcacatt
tacaagcgggacatctcagccaacaaattcatcaaaatccaggatattgacatcctaaaa
atcaggaaacctaatgacattgagactttcctcatagacggtgagtccttcttcgtgatc
gcagacagctccaaggccggttataccacagtgtacaagtggaacggctatgggttctac
tctcaccagtccctccatctctggtaccgtgacacagacgtggagtacctagagatctct
ggtaagccccatctgatcctagccagcagttcccagaggcctgtcgtctaccagtggagc
aagagtctgaagcagttcgacaggcgcactgatatccccgaaatggaggacgtgtttgcg
gtcaagcacttcaaggtgaagaatgaacttttcatctgcctgacgcgttttattggggac
tccaaggtgatgaggtgggacggcgccatgttcaaagaggtacagacaatgccttcgcgg
ggctccatggtgttccagccagtctccatcggcaactggcagtacgccatcctcggcagc
gactactccctgacgcaggtctatcagtgggatttgaagaggggccaatttgttcacttc
caggacctgaacatccaggcaccaagggcattctctctggtgtccattgacaacagagag
tttctgctggcctccagctttagagggaaaactcagatatacgagcacctaatgattgac
ctgagtaataattaa
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