Salmo salar (Atlantic salmon): 106589611
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Entry
106589611 CDS
T04363
Symbol
rfng
Name
(RefSeq) RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00514
Other types of O-glycan biosynthesis
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106589611 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106589611 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106589611 (rfng)
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
106589611 (rfng)
Glycosyltransferases [BR:
sasa01003
]
Glycan extension
O-Glycan
106589611 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
106589611
NCBI-ProteinID:
XP_014035271
UniProt:
A0A1S3Q5T8
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Position
ssa28:complement(16283254..16296911)
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AA seq
419 aa
AA seq
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MHVSSMGVSKLCFLFSLALCALLLLLIPALQPSQHQGDLPQPRAHTKPARAGTGASKSPQ
HHGGLVVPLQADVGKVTVGRNGIVGGSIGQGTPRETKRTGDGDWVYTAGRGDTQANGKHT
DSQTGPKENFLHRAGVVVGAGRSRSRTPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKA
KEQTFIFTDGEDQELRRRAGANVVNTNCSAAHTRQALCCKMSVEYDKFIESQRKWFCHMD
DDNYVIVPSLLKLLSSFQHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFC
ISRGLALKMSPWASLGNFISTAEKIRLPDDCTIGYIIEALLEVPLTHTHLFHSHLENLQR
LPTDTVLEQVTLSYGGFENRRNVVSIGGAFSLVEDPSRFKTVHCLLYPETDWCPSEGHH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcctcgatgggtgtcagcaagctctgctttctgttctccctggccctctgt
gccctcctgctgctcctcatccctgcccttcagccctcacagcatcagggggacctgcct
cagccgcgggcccacaccaagcctgcccgggcaggcacaggtgccagcaaatccccccag
caccatggaggtctggtggtccctctccaggcagatgtggggaaagtgacagtgggacgt
aatgggattgttggtggatctatagggcagggcacacccagagagaccaagaggactggg
gatggggactgggtgtatacagctggtcgaggtgacacccaggccaatgggaagcataca
gactctcagacagggccgaaggagaacttcctccacagagctggagttgtggtgggggct
ggaaggtctcggtccaggacccctctagagctgaaagacattttcatagcggtgaagacc
accaggaagtaccacaagtccagactggatttgctgttccagacctgggtgtccaaagcc
aaagaacagacctttatattcactgatggggaggaccaggagctgaggaggagagcaggg
gctaatgtcgtcaacaccaactgttcagcagcacacacgcggcaggccctgtgctgtaag
atgtctgtggaatacgacaagttcatcgagtcgcagaggaagtggttctgccatatggat
gatgataactatgtgattgtacccagtctgctgaagctgctgtcctccttccaacacacc
caggatgtttacctgggccggcccagcctcgaccaccccatagaggctgcagagagggtc
aagagtgacggatctgtgtcggtgaagttctggtttgctacaggaggtgcagggttctgt
atcagtcgtggtctggccctcaagatgagtccatgggctagtctggggaacttcatcagc
acggcggagaagatccgtctccctgacgactgcactatcggttacatcatcgaggcgctg
ctggaagtgccgctgacacacacccacctcttccactcccacctggagaacctgcagagg
ctgcccacagacaccgtgctggaacaggtcactctgagctatgggggttttgagaacagg
aggaatgtggtcagcattggaggagctttctctctggtggaggacccctcacggtttaag
actgtccactgcctcctctacccagagactgactggtgtcctagtgaggggcaccattga
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