Salmo salar (Atlantic salmon): 106593225
Help
Entry
106593225 CDS
T04363
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106593225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106593225
Membrane trafficking [BR:
sasa04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
106593225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
106593225
NCBI-ProteinID:
XP_014040041
UniProt:
A0A1S3QJ62
LinkDB
All DBs
Position
Un
Genome browser
AA seq
1138 aa
AA seq
DB search
VVLGVSGGGGRSPSSRVVLGVSGGGGRSPSSRVVLGVSGGGGLSPSFRVVLGVSGGGGCS
PSSRVVLGDSMERVVLLPPGWCWVSLEEVVVSFLQGGAGCLSGRWLCPSSRVVLGDSGGG
GSPSSRVVLGVSGGGGRSPSFRVVLGDSMEVVVLLPPGWCWVSLGEVVLLPPGWCWVSLV
EVVVLLPPGWCWVSLGKVVLLPPGWCWVSLGEVVVLLPPGWCWVSLGRLLCPSSRVVLGD
SAEIVVFFLQDSRVLLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQF
QELSHRFSRASECLKTGNRRAFARELHRKLQDLEYTRSVLHAALQGISNDSEEIGEEAEL
QKTANELASVDRSILDHRSLLHQVTSYPNRKLKDPGFLPYDPSLIPETLPLTPDPPSPSY
TPQLVSGASLGGGGWSARRFDRRLKPLEELSDCYFLSLTLEQLGNAESRLRGDQSVLHNR
CVTRKLSRMLSHTHFLFQLWDQEEEEEEEDLEEEGAGLEGGSGLMSNPVEWAGAGPQSME
SFFSCVEEVSIKLETGSGGAGPTLDPAGGEEVTTETRPGSVSSGDSIEVLGTERSYRTQG
LTHVELRELSVQGEGCDEVRSRTPAEAGTRRDVRSLARRANSEDSIEVISTSDSIFPDDL
LIFTAITEEEPEEHGIMGTVIQEEEEEEAAGEDTPIQQHGTLGIIVHEEEEEHTWHQRIM
GNVVQTEGEEELEDTPTRPHSTLGIEVQELEEEEEEKQERCDTPVPMSEPQGTLVHQVPV
EGSSKQYEGHHANGEVIGQAGRDSRRRAVPDLQVNFSIPLRLEVRVHGSGEGRRLLGDTP
YRLSVDEGSDCMSYVGSASPPTSLAPARLRGNRGAGNPRQRRKAGLGALRFLRQNSFSQN
AVFCLLSGRPLVVIGGEEGSVRRTVAALSLYLPSPGRYGDAVQPNLATPLQLTDLLTWRL
IGIHRTSPTAPSMLHSLVRYGRYLAVLDLDQRTLRSPAYHGHLIGRLANPHTLIGRGSTY
LLHVESCLTELTAKAFLFSCSPDLSTLTSGRAQSLPGGQAPPVCHRASQLPSVPREDDDF
TLTRRRIDFLCERGFSGEDDLRVMHFLSDLVKQHHAGSGPPALRFSYSAVPLHRNTTT
NT seq
3418 nt
NT seq
+upstream
nt +downstream
nt
ggtggtgctgggtgtctctgggggaggtggtcgttctccttcctccagggtggtgctggg
tgtctctgggggaggtggtcgttctccttcctccagggtggtgctgggtgtctctggggg
aggtggtctttctccttccttcagggtggtgctgggtgtctctgggggaggtggttgttc
tccttcctccagggtggtgctgggtgactcaatggagcgggttgttctccttcctccagg
gtggtgctgggtgtctctggaggaggtggttgtgtccttcctccagggtggtgctgggtg
tctctcggggaggtggttgtgtccttcctccagggtggtgctgggtgactctgggggagg
tggttctccttcctccagggtggtgctgggtgtctctgggggaggtggtcgttctccttc
cttcagggtggtgctgggtgactcaatggaggtggttgttctccttcctccagggtggtg
ctgggtgtctctgggggaggtggttctccttcctccagggtggtgctgggtgtctctggt
ggaggtggttgttctccttcctccagggtggtgctgggtgtctctggggaaggtggttct
ccttcctccagggtggtgctgggtgtctctgggggaggtggttgttctccttcctccagg
gtggtgctgggtgtctctggggagattgttgtgtccttcctccagggtggtgctgggtga
ctcagcggagattgttgtgttcttcctccaggactccagggtgttgctgggtgactctaa
ggagggtgcatttgcctacgttcaccacctgactctgtatgacctggaggcccgaggctt
cgtccgcccgttctgcatggcctacgtctccgctgacgagaggaagatcatgctgcagtt
ccaggagctgtcgcaccgcttctcccgcgcctccgagtgcctcaagaccggaaaccgacg
ggccttcgcccgcgagctgcacaggaagctacaagacctggagtacacacgatccgtcct
tcatgcggcgcttcaagggatatccaatgatagtgaggagatcggggaggaggcggaact
gcagaagacagccaacgagcttgctagcgtggatcgatccatcctggaccacagatccct
cctccaccaggtcacgtcctatcccaacaggaagttaaaagaccctggctttctgcctta
cgacccctccctgatcccagagaccctccccctgactccggatcccccctccccctcata
caccccgcagctggtttccggggcgtcgctaggtggtgggggctggtcagcgaggcggtt
cgaccgccgtctgaagccattggaggagctgagcgactgctacttcctgtctctgacgct
agaacagctgggcaacgcagaaagccgtcttcgcggagaccagagtgttctacacaaccg
ctgcgtcacacgcaagctctccaggatgctttcacacacacacttcctgttccagctctg
ggaccaggaagaagaggaggaggaggaggatctggaggaggaaggggcggggctagaggg
aggaagtggcttgatgtcgaatcctgtggagtgggcgggtgcgggaccacagagcatgga
gtcgttcttctcttgcgtggaggaggtgtcaatcaagctggagacaggaagtggaggggc
ggggccgacactcgatcctgcggggggagaagaagtaaccacggagacgagaccaggcag
cgtgagcagcggagacagcattgaggttctggggacggagcgctcgtatagaacacaggg
actaacccacgtggaactcagagagttgtcggttcagggtgaaggctgtgatgaggtgcg
gagtcgtacccctgcggaggccgggacgaggcgtgacgtgcggtccctggcgcgaagggc
gaacagcgaggacagcattgaggtcatcagcacctcggactccatcttccccgacgacct
cctcatcttcaccgccatcacagaggaggagcctgaggagcatggaatcatgggtactgt
aatccaggaagaggaggaggaggaggcggcaggtgaggacacgcccattcagcagcacgg
caccctgggtattatagttcacgaggaggaggaggagcacacttggcaccagagaatcat
gggtaatgtagtccagacggagggagaggaggagctagaggacactcccactcggccgca
cagcaccctgggtattgaagtccaggaattggaggaggaggaggaggagaagcaagagag
atgtgacactccggtccccatgtctgagccccagggaactctggtccaccaggtgccagt
agagggctcctccaagcagtacgagggtcaccatgccaacggcgaggtcataggtcaggc
tgggcgtgacagcaggcggcgggcggtgcctgacctccaggtgaacttttctatccccct
gaggttagaagttagagttcacgggtcaggagaggggcggcggttgctaggcgacacccc
ttacaggctgagcgtagacgaggggtcagactgtatgagctacgtcggcagcgcctctcc
acctacctctctggcccccgcacgtctccgcggcaaccgcggcgccggtaacccgcgcca
gaggaggaaggcgggtctcggagccctcaggttcctgcgtcagaattctttctcccagaa
tgccgtgttctgcctgctgagcggccggccgctggtggtgattggcggagaggagggttc
cgtgaggaggacggtcgctgccctctcgctctacctgccttcacccggtcgctacggaga
tgctgtgcagcccaacctggccacgcctcttcagctgacagacctgctcacctggagact
catcggaatccacaggacgtctcctacagctcccagcatgcttcactctctggttcgtta
cggacgatacctggccgtgctggacctggatcagcgtacactgagaagccccgcttacca
cggacacctcattggccggctggccaacccccacactctgataggtcgtggcagcaccta
ccttctccacgtggagagctgcctcactgagttgaccgctaaggcgttcctgttctcctg
ttctcctgacctttcaactctaacctcgggtcgagctcagagtttacctgggggtcaggc
accacccgtctgtcaccgcgcctctcagcttcccagcgtccccagggaggacgatgactt
cacgctgactcggcgtcgcattgactttctgtgtgagcggggtttcagcggggaggacga
cctccgggtgatgcacttcctgtctgacctcgtcaaacagcaccacgcaggaagtggtcc
tccggccctccgcttctcctacagtgccgtccctttgcatagaaatacgacaacatag
DBGET
integrated database retrieval system
