Salmo salar (Atlantic salmon): 106595815
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Entry
106595815 CDS
T04363
Name
(RefSeq) actin, cytoplasmic 1-like
KO
K05692
actin beta/gamma 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
sasa04145
Phagosome
sasa04210
Apoptosis
sasa04510
Focal adhesion
sasa04520
Adherens junction
sasa04530
Tight junction
sasa04810
Regulation of actin cytoskeleton
sasa04814
Motor proteins
sasa04820
Cytoskeleton in muscle cells
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106595815
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106595815
09143 Cell growth and death
04210 Apoptosis
106595815
09144 Cellular community - eukaryotes
04510 Focal adhesion
106595815
04520 Adherens junction
106595815
04530 Tight junction
106595815
09142 Cell motility
04814 Motor proteins
106595815
04820 Cytoskeleton in muscle cells
106595815
04810 Regulation of actin cytoskeleton
106595815
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106595815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106595815
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106595815
03036 Chromosome and associated proteins [BR:
sasa03036
]
106595815
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106595815
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106595815
04147 Exosome [BR:
sasa04147
]
106595815
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106595815
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
106595815
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
106595815
NuA4 complex
106595815
Chromatin remodeling factors
BAF complex
106595815
PBAF complex
106595815
GBAF(ncBAF) complex
106595815
SWR1 complex
106595815
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
106595815
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
106595815
Exosome [BR:
sasa04147
]
Exosomal proteins
Proteins found in most exosomes
106595815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
106595815
NCBI-ProteinID:
XP_014042641
UniProt:
A0A1S3L3A7
LinkDB
All DBs
Position
ssa02:72398258..72402849
Genome browser
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaatcgccgctctggtcgttgataacggctccggtatgtgcaaagccggt
ttcgccggagatgatgctcctcgggccgtgttcccctccatcgtgggtcgccccagacat
cagggagtgatggttggcatgggccagaaggacagctacgttggagacgaggctcagagc
aagaggggtatcctgactctgaagtatcccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggcaccagaggag
cacccagtcctgctcaccgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctctggccgtaccaccggtatcgtcatggactccggcgacggcgtgacc
cacacggtacccatctacgagggttacgctctgccccacgccatcctgcgtcttgatctg
gccggacgcgacctcacagactacctgatgaagatcctcacggagcgcggttacagtttc
accaccacggccgagagggaaatcgtacgtgacatcaaggagaagctgtgctacgtggcg
ttagactttgaacaggagatgggcactgccgcctcctcttcctctctggagaagagctac
gagctgcccgacggacaggtcatcaccatcggtaacgagaggttccgttgtccggaggcc
ctcttccagccctccttccttggtatggagtcttgcggtatccacgagacgaccttcaac
tccatcatgaagtgtgacgtggacatccgtaaggatctgtacgccaacacagtgctgtcc
ggaggaaccaccatgtaccccggcatcgctgacaggatgcagaaggagattacgtctctg
gctccttccaccatgaagatcaagatcatcgcccctccagagcgtaaatactccgtctgg
atcggaggctccatcctggcttctctctccaccttccagcagatgtggattagcaagcag
gagtacgacgagtccggtccctccatcgtccaccgtaaatgcttctaa
DBGET
integrated database retrieval system