Salmo salar (Atlantic salmon): 106600975
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Entry
106600975 CDS
T04363
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04620
Toll-like receptor signaling pathway
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106600975
04621 NOD-like receptor signaling pathway
106600975
04622 RIG-I-like receptor signaling pathway
106600975
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106600975
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
DUF4559
Crescentin
zf-TRAF_2
Sina_ZnF
BLOC1_2
zf-RING_UBOX
DUF1664
CALCOCO1
TolA_bind_tri
FapA
Snapin_Pallidin
Fez1
SKA1
Spc7
Motif
Other DBs
NCBI-GeneID:
106600975
NCBI-ProteinID:
XP_014048262
UniProt:
A0A1S3R8U3
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Position
ssa01:34230723..34246311
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AA seq
573 aa
AA seq
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MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISEQLSKPNPVCPEDKEPLFKDKVFRDVCCNREIM
ALRVYCRSEKNGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHDCPKAQVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSQYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKICDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggcttcagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctttgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgtatctctgagcagctaagcaaaccgaatccagtatgtccagaagat
aaggaacctctgttcaaagacaaggtcttccgtgacgtatgctgcaatagagagatcatg
gctctgagagtgtactgcaggagtgaaaagaacggctgtaaggagcagataagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgccctttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttggaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgaattacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacaagtcatcaacatgactgtccaaaggctcaggtcacctgc
tcctttatccgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccaggaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccaggcctgagc
agccgtctgtctgaaacattgtctcagtacgaggagatgagggagaagaatagacagctg
gaccagaagctcaataccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtagagaccctccgagga
actgtggagagcatccgctccagagttgccactctagaaggaggacggggcggggccaac
ccagccacacacacactagagacgcagctctcccgtcacgacgacatgctgagcgtccat
gagatccgcctagcagacatggacctgcgcttccaggtcctagagacggcctccttcaat
gggatgctcatctggaagatctgtgactacaagcggcggaaacaagaagccgtggcgtca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggtgacggcatggggaaaggaacccacctgtctctgttcttc
gtggtgatgcgtggcgagtacgacgccctgctgccctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccaggaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcgggctgcccg
ctgttcgtggcccagacagtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga
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