Salmo salar (Atlantic salmon): 106601055
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Entry
106601055 CDS
T04363
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106601055
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
106601055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
UNC45-central
Cnd3
Cnd1
Motif
Other DBs
NCBI-GeneID:
106601055
NCBI-ProteinID:
XP_014048432
LinkDB
All DBs
Position
ssa03:62073433..62092547
Genome browser
AA seq
1693 aa
AA seq
DB search
MMNRPKPTTIRRPSAAKPSGHPPPGDFIALGSKSGAESKAPAVLLKPASTLPTDRKRETS
SSLPSSSGLSGLVKRPKISSTPPVSALGRLADVAAVDKRAISPSIKEPSVVPIEVPPAVL
LDEIENAEQDGNDDRIEGVLCGAVKQLKMNRAKPDITLYLSLMFLAKIKPNLFATEGIIE
ALCSLLRRDASINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVD
SSHCKNFVDNIQTAFSTKMPPKSMLLQLQTDTGRSGGDISAGSSPHPSTPDEDDSQTELL
IAEEKLSPEDDGQVMPRYEELSESVEDYVLDVLKDQLNRRQPMDNVSRNLLRLLTATCGY
KEVRLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNSHGADDMEVISNLIKIRLKPKVIL
NHYMLCVRELLNAHKDNLGTMVKLVIFNELSNARNPNNMQVLHTLLQHSPEQAPKVKEYS
MTSEGPGLSLVLTEGGLKDGEERDQPMEEDSRDAELLPGYQWLLQDLPKLPLFDSVRGMT
STALQQAIHMETDPQTISAYLIYLSQHAPVEEQASHNDLALDVARLIVERSTIMNSLFSK
YSCRPESDAVLSALISIFSSYIRRMRKTKEGEDLYSWSESQDQVFLRWTTGETATMHILV
VHAMVILLTLGPPKEESDFFNLLDIWFPDKKPLPTAFLVDTSEEALLLPDWLKLRMIRSE
VSRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVSHDSQTLEQNIMDKNYMA
HLVEVQHERGATGGHTFHGLLSSSLPPRRDSTEVNRAKVTVETPSGSLKMRANQIPVIGP
EDDLTGMLLQMFPLKVDHRRPSPPPRPLSLALQQALAQELVRARQGGHPQQGGVAVRLLQ
ALAALLSSAHAGALVMAMNRCHALSCPMLRQLHLYQRLVSQDVAFSSLFFKAVMEMMTWL
ENPAVEVGPLRALLKSFAGQYSQKHRLTDVRTGFLHLAEALAYRRDSEVAVRAIIATLKA
GERCNAEPELIGKVLQGLVEGKSPYLEELLALLMTIGTETGTGSTTAGPVAMVIALLLQE
TEEQAVKMEVDTNNSSSEVTKTGSSSGLLVDWLGLLDPEVTSVCPDLQRKLLFALNKGKG
TPSYRPYLLALLTHQSNWTTLHQCISALLSKQQDQRLDPSSALDFLWACSHIPRIWQGRD
QKTPQKQTDTFVLRLNPEELISLVDLIMSESELHSRGDSSPPSNAPGNAKSTLDHTSCSL
IQSRLPLLHSCCHGDLERVKKVSEYLINCTKKWGDSVMSKRCQNLLLQLYLHFPEVIQHV
TLPDATLSSEGAANGTTCKHDVLVHRLVTLLGDTGDTKSAENRMSDANLACRKLAVSHPV
LLLRHLPMIGALLHGRIHLNFQEFRSQNHLTFFSNVLAILELLQPLVFHGEHQRALQDCL
LSFMKILQNLRRPRMHPLAVFSKYVQFIQKYITHDAATAIPYLQKHSDILQGLSSEHPDL
LLKSLLAGLTLPVKTGSSDSSAEDRDDESSSGSLPMVSISASVPLTAADMTKYLKKISRG
EAIEDVLEVLTEVEDKSKRNPEIIQYFTNDLQRLMSSTEELCRNMAFSLALRCIQNNPCT
AADFLPTFMYCMGSGNFDVVQTALRNLPEYVLLCQEHADILLHKAFLVGIYGQIDTSSMI
SESMKVLHMEATT
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgtcccaagcctacaacgatcaggcggcctagtgctgcaaagccctcaggt
caccctcctcctggagatttcatagcattggggtcaaagagtggcgcagagtccaaagca
cctgcagttctccttaagccagcgtccaccttacccactgaccgtaaacgagagacttcc
tcgtcacttccatcctcctctggcctgtccggcctcgtgaagcgccccaagatctcctct
acacctcctgtcagtgccctaggacgactggctgatgtggcagcagtggacaaaagggct
atatcgccttcgatcaaggagccctcagtggtgcccatagaagtccccccagcagtgctc
ctggatgagattgagaatgcagagcaggatggaaatgatgatcgcattgaaggggtgctc
tgtggagctgtcaaacagctgaagatgaaccgggctaaacctgacataacactatacctc
agcctcatgttcctggccaagattaagcccaatctcttcgccactgaaggcattattgag
gccttgtgcagtctccttcgccgggatgcctccatcaacttcaaagcaaagggcaacagt
ctggtgtctgtgctagcctgcaacctgctgatggcagcctatgaggaggatgagaactgg
ccagagatctttgtcaaagtgtacattgaggactctttgggggagcgaatttgggtagac
agttcccattgtaagaattttgtggacaatatccagactgccttcagtaccaaaatgccc
ccaaagagtatgctgctgcagttgcagactgacactggccgctccggtggagatatcagt
gcagggagcagtcctcacccctccaccccagatgaggatgacagccagactgaattgctg
attgctgaggagaaacttagtccagaagatgatggacaagttatgccaaggtacgaggag
ctgtctgagagtgtggaggactatgttctagatgtcctgaaggaccagttgaaccgcagg
cagcccatggacaatgtgtcccgtaacctgctgcgtctgctcactgccacctgtggctac
aaggaggtgcggcttatggctgtgcagaggctggagatgtggctgcagaatccaaagctg
acccgtccagctcaggaccttctcatgtctctctgtatgaactgcaactcccatggagcg
gatgacatggaggtgatctccaacctcatcaagatccgcctgaaacctaaagtcatcctc
aatcactacatgctctgtgtcagggagctactgaatgcacacaaagacaacctgggaact
atggtgaagctggtgatcttcaatgagctgtccaatgccaggaaccccaacaacatgcaa
gtccttcacacactgctccagcacagcccagagcaggcccctaaggtgaaggagtattcc
atgactagtgaaggcccaggtctgtctctggtgctgactgaggggggtctgaaggatgga
gaggagagggaccagcccatggaggaggactccagagatgctgagctcctgccagggtac
cagtggctcctgcaggacctccccaagctgcccctgttcgacagcgtccggggcatgacc
tccaccgctctgcagcaggccatccacatggagacagacccacagaccatcagcgcctac
ctcatctacctgtcccagcatgcaccagtggaggagcaggcgtctcacaatgacctcgct
ctggatgtggcccgtctgattgtcgagcgctccaccatcatgaacagcctgttctccaag
tactcctgtcggcccgagtcagacgctgtgctctcagccctcatctccatcttctccagc
tacatcaggaggatgaggaagaccaaagagggagaggacctttacagctggtcagaatct
caagaccaggtgtttctgcgttggaccacaggggagacagccaccatgcacattctggtg
gtccatgcgatggtcattctcctgacgctcggtccacccaaagaggagagtgacttcttc
aacctcctggacatctggttccccgacaagaaacccctccccaccgccttcctggtggac
acctccgaggaggccctgctgctacctgattggttgaagctgaggatgatccggtcagag
gtttcacgattggtggatgcagcgctgcaggatctggagccccagcagctgctgctgttt
gtccagtcgtttggcatccccgtgtccagtatgagtaaactgctgcagtacctggaccag
gccgtatcccacgactcacagacactggaacagaacatcatggacaagaactacatggct
catctggtggaggtgcagcatgagcgaggcgccacaggggggcacactttccacgggttg
ctcagctcctctctccctcctcgcagagatagtactgaggtgaacagagccaaagttacc
gtggaaactcctagtggctccttgaagatgagagccaatcagatcccagtgattgggcct
gaggatgacctcaccggcatgttgcttcagatgttccctctgaaggtggaccaccgcagg
cccagcccccctccccggcccctctccctggccctgcagcaggccctggcccaagagctg
gtgcgtgccagacagggggggcacccccagcagggtggggtggcagtgcgtctcctacag
gccctggctgccctgctcagctctgcccacgccggggccctcgtcatggccatgaaccgc
tgccacgccctgtcctgccccatgctgcgccagctgcacctctaccagcggctggtgtcg
caggacgtggccttctcctctctcttcttcaaggctgtcatggagatgatgacatggttg
gagaacccggctgtggaggtggggccgctgcgggccttgctcaagtcattcgctggacag
tattcccagaagcaccggctcactgatgttcgtacaggcttcctccacctggctgaggcc
ctggcttatcggagggactccgaggtggccgtgagggccataatcgccacactgaaggca
ggggagagatgtaacgcagagccggaactgataggcaaagtgttacaggggctagtggag
gggaagtctccatatttggaggaactgctggccttgctaatgactattggaacagagacg
gggaccggctctaccaccgcaggccctgttgccatggtgatagcactgcttctccaggag
actgaagagcaagccgtgaaaatggaggtggatacaaacaacagcagctctgaggtgaca
aagactgggtccagctcagggctgcttgttgattggctgggacttcttgaccctgaggtc
acatctgtgtgtccagaccttcagcggaagctgctctttgctctcaacaagggtaaagga
actccctcctacagaccataccttctggcattgctgacccatcagtccaactggacaact
ctgcatcagtgcatcagtgctcttctcagcaagcagcaagaccagcgactggacccatct
tctgctctggacttcctgtgggcctgcagtcacatccctcgtatctggcagggccgggac
cagaagaccccacagaaacagacagatacatttgtcctgcggttgaacccggaggagctt
atcagtctggtggacctcatcatgtcagagtctgagctccacagccgcggcgactcctct
cccccttccaacgcccccggcaacgccaagagcaccctggaccacacctcctgctccctc
atccagtcacggctgcccctgctccacagctgttgccatggcgacctggagagagtgaag
aaagtctcggaatacctcatcaactgcacaaagaaatggggtgacagtgtgatgagtaag
cggtgccagaacctcctactccagctctacctgcacttcccagaggtcatccagcacgtg
accttacctgacgccaccctgagcagcgagggggccgccaacggcaccacatgcaagcac
gacgtcctggttcaccgtctggtcacgttgctaggcgatacgggagacacaaagtcggct
gagaaccggatgtcagacgctaacctggcctgcaggaagctggctgtgtcccaccctgtc
ctcctcctcagacacttgccgatgatcggagcgcttctccacggacgcatccacctcaac
ttccaggagttccggagccagaaccacctgacgttcttcagcaacgtgctggccatcctg
gagctgctgcagccgttggtgttccacggtgaacaccagagggcgctgcaggactgcctg
ctctccttcatgaagattctgcagaacctcaggagacctcgtatgcatccgttggccgtc
ttcagtaaatatgtgcagttcattcagaagtacattacccacgatgcagcaacagccatt
ccctatctacagaagcattccgatatcctacaggggctctcatcagagcaccctgacctg
ctgctcaagtccctactggctggcctcaccctgcctgtgaagactggctcctctgacagc
tctgcagaggacagagatgatgagtcgtcctctggttccctgcccatggtcagtatctca
gcctccgttccactgactgcagctgacatgaccaagtacctgaagaagatctccagggga
gaagccatagaagatgtgctggaagttctgaccgaggtggaggacaagtccaagaggaat
cctgagatcatccagtacttcactaatgacctgcagagactgatgagttctactgaggag
ttgtgtcgtaacatggccttcagcctggccctgcgctgcatccagaacaacccgtgcact
gcagcagacttcctgcccaccttcatgtactgtatgggcagcgggaactttgacgtggtg
cagacagcgcttaggaacctgccagaatacgtgctgctctgtcaagagcatgcagacatc
ttactccacaaggccttcttggtggggatctatgggcagattgacaccagctctatgatc
tctgagtccatgaaggtcctgcacatggaggcaacaacatga
DBGET
integrated database retrieval system
