Salmo salar (Atlantic salmon): 106601243
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Entry
106601243 CDS
T04363
Symbol
rbx1
Name
(RefSeq) ring-box 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
sasa04110
Cell cycle
sasa04114
Oocyte meiosis
sasa04120
Ubiquitin mediated proteolysis
sasa04141
Protein processing in endoplasmic reticulum
sasa04310
Wnt signaling pathway
sasa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106601243 (rbx1)
04120 Ubiquitin mediated proteolysis
106601243 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
106601243 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106601243 (rbx1)
04350 TGF-beta signaling pathway
106601243 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106601243 (rbx1)
04114 Oocyte meiosis
106601243 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106601243 (rbx1)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106601243 (rbx1)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
106601243 (rbx1)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106601243 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
106601243 (rbx1)
Cul2 complex
106601243 (rbx1)
Cul3 complex
106601243 (rbx1)
Cul4 complex
106601243 (rbx1)
Cul7 complex
106601243 (rbx1)
Cul8 complex
106601243 (rbx1)
Cul9 complex
106601243 (rbx1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106601243 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
106601243 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Arif-1
DUF8003
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
106601243
NCBI-ProteinID:
XP_014048765
UniProt:
Q8QG64
B5X694
LinkDB
All DBs
Position
ssa03:65598456..65602936
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag
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