KEGG   Salmo salar (Atlantic salmon): 106601243
Entry
106601243         CDS       T04363                                 
Symbol
rbx1
Name
(RefSeq) ring-box 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03420  Nucleotide excision repair
sasa04110  Cell cycle
sasa04114  Oocyte meiosis
sasa04120  Ubiquitin mediated proteolysis
sasa04141  Protein processing in endoplasmic reticulum
sasa04310  Wnt signaling pathway
sasa04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106601243 (rbx1)
   04120 Ubiquitin mediated proteolysis
    106601243 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106601243 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    106601243 (rbx1)
   04350 TGF-beta signaling pathway
    106601243 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    106601243 (rbx1)
   04114 Oocyte meiosis
    106601243 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sasa04121]
    106601243 (rbx1)
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106601243 (rbx1)
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     106601243 (rbx1)
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   106601243 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     106601243 (rbx1)
   Cul2 complex
     106601243 (rbx1)
   Cul3 complex
     106601243 (rbx1)
   Cul4 complex
     106601243 (rbx1)
   Cul7 complex
     106601243 (rbx1)
   Cul8 complex
     106601243 (rbx1)
   Cul9 complex
     106601243 (rbx1)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      106601243 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106601243 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 Arif-1 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 106601243
NCBI-ProteinID: XP_014048765
UniProt: Q8QG64 B5X694
LinkDB
Position
ssa03:65598456..65602936
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

DBGET integrated database retrieval system