Salmo salar (Atlantic salmon): 106602946
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Entry
106602946 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106602946
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106602946
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106602946
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106602946
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PKD_channel
LHD_TRPY1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
106602946
NCBI-ProteinID:
XP_014051460
UniProt:
A0A1S3RGP3
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All DBs
Position
ssa04:complement(33035523..33066868)
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AA seq
1042 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRSSREKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDLSEELDPQDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFTIGLLFPIFSLVYLLAPKSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRPREEWEMWHPTL
IAEGLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWTHNRLCGRDHPSPDDPRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGDRKPPRRTYSSS
SEATQQDEANEEEGAGQAQGQSRDQGAKGVSFSTSITERKSKDSGFSVSALFKSMSGAEG
AVDNRPKSNGLRFSSSPTSSAALTRSSGRLQRFSKSKRDSIRRLGLLFSRMNGHVPEPRS
PPPRMHQPTYSISDGLLRQPTTWPDIQIPPNPPVTRSLFHLGQLGGNLKELPHAPPQALP
LVSPQQANRSDSLLLLPTGHSLPPPGHSLPPLHCASSITASSSRAVLLGSSEDMFEGWIG
PCDELDSSEWGAEQEDSITTQL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgcgac
cgcatcccgctgcagatcgtgcgggcggaagcggagctgtcagcggaggagcgggcgtac
ctgacggcagtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtcaactgcctggacccgctggggcgcagcgcgctgctcatc
gccatcgagaacgagaacctggaggtgatggagctgctgctcaaccacggcgtgcatgtg
ggcgacgcactactctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctg
tcccatcgcaggtccagcagagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactatgag
atcatcaagctgctggtccagcgcaaggtgaccatcccccggccacaccagatccgctgc
gactgcgtggcctgcgtgtccagctccgaggtggacagcctgcgtcactcacgctcccgc
ctcaacgtctacaagaccctggccagcccgtccctcatcgccctgtccagcgaagacccc
atcctgactgccttccgcctgggctgggagctgaaggagctaagcaaggtggagaatgag
ttccgtcaggagtacgaggagctgtcccagcagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctctagagagctggagaccatcctcaaccaccgcgatgacctcagt
gaggagctagacccacaggactgccgtgacctggccaagctcaaactagctatcaagtac
caccagaaagagtttgtatcccagccaaactgtcagcagctcctggccaccctgtggtac
gacggtttccccgggtggcgtagacgccactgggcggtcaagctggtcacctgcttcacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccccaagagcgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
tttcttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccgccgcccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggacggaggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccactatctcactcaaaatagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccgacgctg
atcgccgagggcctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctg
ttcacagccaactcccacctggggcctctgcagatctccctggggcgcatgctgctggac
atcctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacgggctcaac
caactgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgcgagaagcagaacaatgccttctctacgctatttgagacgttgcagtccctgttc
tggtcgatattcggcctgctcaacctgtacgtgaccaacgtgaaggcacgccatgagttc
acagagtttgtgggggccaccatgttcggtacctacaacgttatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctatcagctcatcgctgaccatgcggac
attgaatggaagtttgcccgcaccaagctgtggatgagttattttgacgagggaggaact
ctccctccgcccttcaacatcgtccccagccccaagtcagtgtggtacctgtgtgtgtgg
acgcacaaccgcctgtgtggacgggaccatcccagtcctgacgacccaaggaaacacgag
aacttaaaggagttcacggagcggcatgctgacaacctgattcagaaccagcattatcag
gaggtgatcaggaacctggtgaagaggtatgtagcagccatgatccgcagtgctaagaca
gacgagggactgacagaggagaattttaaggagctcaagcaggacatctccagtttccgc
tacgaggtgttggacctgttgggggacaggaagcctccgcggaggacctactcatccagc
agtgaggctacccagcaggacgaggccaacgaggaagaaggggctggacaggcccagggt
cagtccagggaccaaggggccaagggggtatccttcagcacgtcaatcactgagaggaag
agcaaggactctgggttcagcgtctccgccctctttaagtccatgtcaggggcagagggg
gcagtggacaacagaccaaagagcaacgggctcaggttctcctcctcccccacgtcctcc
gctgcgttaacccgcagtagtggccggctgcaacgcttctccaagtccaagagagactcc
atcaggcggctgggcctactcttctcccgcatgaacggacacgtcccagagcccaggtcc
cctcctcccaggatgcaccagcccacctacagcatctcagacggtctgcttcggcagccc
acaacctggccggacatccagatcccccccaatcccccggttacacgcagcctgttccac
ctgggccagctgggggggaacctgaaggagctaccacatgcccctccccaggccctgcca
ttggtgtcaccccagcaggctaacagaagtgacagtctgctcctgctacccacgggccac
tccttaccgccgccaggccactccctgccacccctgcactgtgcttccagcatcacggcc
tccagctcccgggctgtcctcctgggctctagtgaggacatgtttgagggctggatagga
ccttgtgacgagctggactcctctgagtggggggctgagcaggaggactccatcacaaca
cagctttag
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