Salmo salar (Atlantic salmon): 106603118
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Entry
106603118 CDS
T04363
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04517
IgSF CAM signaling
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106603118
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106603118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106603118
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106603118
Intermediate filaments
Intermediate filament-binding proteins
106603118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PAS_8
PH_17
Motif
Other DBs
NCBI-GeneID:
106603118
NCBI-ProteinID:
XP_014051844
UniProt:
A0A1S3RJ29
LinkDB
All DBs
Position
ssa04:36836578..36930310
Genome browser
AA seq
2392 aa
AA seq
DB search
MSTISPTDFDSQEIQQQYNDINNRWDLAAETDWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKE
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDVIEFDSLKRSNAHYNLQNA
FNTAENKLGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRVGKVLDYA
IEADQLVGNYESLASELLQWIEQTILTLNDRQLANSLSAVQNQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGVDLGAVDAATRKHEAIETDIGAYGER
VAAVEAVARELEAENYHDVRRVLARRDNVLRLWEYLKELLAARRERLNAHRDLQRLLQEM
RSIMDWMGEMKGRLQSQDSGKHLHDVEDLLQTHNLVEADISAQAEGVRGVQGAAQRFTSD
QQVYKPCEPALVGEKVSLLGRAYEELGQLAEERRVRLEDSRRLWQFLWELGEEAAWIREQ
EQILSGGDCGRDLASALHLLSKHEAFRDEMAARYGPLGNSIAAGQTLVEEGHIGAPECTE
RIGDVRAQWAHLEKTSQLREQQLKEAVALHQFQTDANDMEAWILETLRQVSSQEVGHDEF
STQTLARKQREVEEEIQSHRTLIDSLHEQALSLPPVHANSPQVEGRLPAIEQRYHELEAL
SASRRQALEGALALYRMYSEAGACQLWVGEKEQWLDGMQIPTKLEDLEVVQQRFETLEPE
MNNLGTRISDVNQVAQQLLGSDNRSKEQIHQTQDQLNNRWKEFQRLADQRKQALESALNI
QNYHLECNEIQSWMREKTKVIESTESLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLKK
EAEKLAEEHPDQAEEIHAHLGEIQEVWQELNATMKRREESLGEASKLQGFLRDLDDFQSW
LSRTQTAVASEDIPTSLPEAEGLLSQHESIKNEVDNYKEDYEKMRAVGDEVTQGQTDAQY
MFLAQRLQSLDTGWHELRRMWENRHSLLAQAFDFQSFLRDVKQAEGFLNSQEYVLSHTEM
PSSLQGAEEAIKKHEDFLTTMEASEEKITGVVEAGRRLVNDLNANSDKIQEKADSIQERH
QKNREAANELLSKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKDWLDKIDKEGQALVTEKPELQPVVQQTLEGLQSQWEELENTTRTKAQCLF
DANRAELFTQSCSALDVWLKNLSGQLQSDDFGKDLTSVNILLKKHQMLEHQMEVREKEVQ
SLQSQALALSQEDAGGAVVEVDSQQRRVTDSFSQLQDPLNQRRQQLLASKEAHQFNRDLE
DEILWVKERMPLATSTDHGKDLSSVQLLIKKNQTLQKEIQGHQPRIDDIQTHRRGMSPGQ
EEMDGGRQSALEGRLAELRDSWAQLIAETDERHARLVEANRAQQFYTDAAEAEAWMGEQE
LHMMSEEKAKDEQSALVMVKKHQTLEQTLEDYAQPIHQLANSSRTMMTSEHPESERINLR
QAQVDKLYAGLKDLAEERRGRLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEH
VTMLRDKFREFARDTSTIGQERVDGVNGLADDLIESGHPENASVAEWKDGLNEAWADLLE
LIDTRTQMLAASYELHRFHQDAREALGRVREKKEALPSDLGRDLNTVQHLHRQHTAYEHD
IQALSGQVNQVQDDAARLQKAYAGEKAEEIHRSERSVTEAWEGLLGAGQARRHVLLDTVE
KFRFVNMVRDLMLWMDGVNLQIDAHDSPRDVSSAGLVIANHQDIKSEIETRADSFTTCIE
MGHSLINNNHYAADEILEKLDQLQGKRDEISNKWQDKMDHLLIVLEVLQFGRDACVAETW
LAGQEPLVRGAELGSNVDEVESLIKRHEAFEKLAAGWEERFTLLEKLTTLEEQEIQRREE
EERARRTPTPPPTEEVAPSEAETHDARTSLDQTTLNQSVSVNGVHSYQDTSQSLSVSSVS
VEKKEKCEPVSKPVSKPKHPLRGSESDSVNGPGRDSGLASSRLDPSATLPSKGDDAGTDA
MEGLLYRKQEMETHAKRAASSFSLSSHRSWQNVYCVLRKGSLGFYKDQKSASNGIPYHGE
VPISLGEAVCEVAHDYKKRKHVFKLRLGDGKEFLFQAKDEPEMASWIHSIQSSIPAGGSG
DRSPGGPRALSRAMTMPPISPSSAEAAGVTMRNKEGKEKDREKRFSFFGKKK
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatctctcccaccgacttcgacagccaggagatccagcagcagtacaatgac
atcaacaaccgctgggacctggccgcagagaccgactgggacaatgagaacagctcggca
cgcctctttgagcgctcgcgcatcaaagctctggcagatgagcgcgaagcggtgcagaag
aaaaccttcactaagtgggtgaactctcacctgggccgtgtgacgtgccgcatcggggac
ctgtacacggacctgagagatggacgcatgctcatccgcctgctggaggtgctgtcagga
gaacagctgccgaagcccaccaaggggcgtatgcgtatccactgcctggagaatgtggac
aaggccctgcagttcctcaaggagcagaaggtccacctggagaacatgggctctcacgac
attgtggatgggaaccaccgcctcaccctaggtctcatctggaccatcatcctccgcttc
cagatccaggacatcagtgtggagactgaggataacaaggagaagaagtctgccaaagag
gccctgcttctctggtgccagatgaagaccgctgggtaccccaacgtcaacgttcacaac
ttcaccaccagctggagagacggcctggcgttcaacgcaatcgtgcacaaacacagaccg
gacgtgattgagtttgacagcctgaagcgatccaacgcccactacaacctccagaatgcc
ttcaacaccgcagagaataagctgggcctcaccaaactcctggacccagaagatgtcaac
gttgaccagccggatgagaagtccatcatcacctacgtggccacctactaccactacttc
tccaagatgaaggccctggctgtggagggcaagagggttggcaaggtgctggactatgcc
attgaggctgaccagctggttgggaactatgagagcctggcgtcagagctgctgcagtgg
atcgagcagaccattctgaccctgaacgaccggcagctggccaactccctgagcgccgta
cagaaccagctgcaagccttcaacacctaccgcaccgtggagaaaccccctaagttcaca
gagaaaggcaacctggaggtgctgctgttcaccatccagagcaagatgagagccaacaac
cagaaggtgtacatacccagagagggcaagctcatctctgacataaacaaggcgtgggag
cgcctggagaaggcggagcacgagcgggagctggcgctgaggaacgagctgattcgccag
gagaagctggagatgcttgccgctcgtttcgaccgcaaggccgccatgagggagacctgg
ctgagcgagaaccagcggctcgtctctcaggacaactttggcgtggacctgggagcggtg
gacgcggcgactcgtaaacacgaggccatcgagacggacatcggggcatacggggagcgc
gtggcggccgtggaggcggtggccagggagctggaggcggagaactaccacgacgtgcgc
cgtgtgctggcgaggagggacaacgtgctgcggctgtgggagtacctgaaggagctgtta
gccgctcgcagggagagactcaacgcacaccgagacctgcagagactgctgcaggagatg
agatccatcatggactggatgggagagatgaagggtcgtctgcagtcccaggacagtggg
aagcacctgcacgatgtggaggacctgctgcagactcacaacctggtggaggcagacatc
tcagcccaggcagagggggtccgcggggtccagggggccgctcagcgcttcacctcggac
caacaggtctacaaaccgtgtgagccggcgctggtgggagagaaggtgtctctgctaggg
cgggcctatgaggagctgggccagctagctgaggagcggagggtgcgcctcgaggattca
cggcgcctctggcagttcctgtgggagctgggagaggaggcggcctggatcagagagcag
gagcagatcctgtcaggaggagactgtggccgcgacctcgcctccgccctgcacctcctc
agcaagcacgaggccttcagggacgagatggcagcccgctacggccctctgggcaacagc
atcgccgccggacagaccctggtggaggagggacacattggagccccagagtgcactgag
aggatcggggacgtccgcgctcagtgggcacacctggagaagacgtcccagctgagggag
cagcagctgaaggaggcggtggccctgcaccagttccagacggatgccaacgacatggag
gcctggatcctggagacgctgcgccaggtgtccagccaggaggtgggccacgacgagttc
tccacccagaccttggcccgcaagcagagggaggtggaggaggagatccagagccaccgc
accctcatcgactccctgcacgagcaggccctcagcctgcccccggtccatgctaactcc
cctcaggtagagggccgtctgcctgccatagagcagcgttaccacgagctggaggccctg
tctgcgtcgcggcgtcaggccctggagggggcgctggccctctaccgcatgtacagcgag
gcgggcgcctgccagctgtgggtgggggagaaggaacagtggctggacggcatgcagatc
cccaccaaactggaagacctggaggtggtgcagcagaggttcgagaccctggagcctgag
atgaacaacctggggactcgtatctctgatgtcaaccaggtggcccaacagctgctggga
tcagacaaccgcagcaaagagcagatccaccagacgcaagaccagctcaacaacaggtgg
aaggagttccagcgtctggcggaccagaggaaacaggccctggaatcggccctcaacatc
cagaactaccacctggagtgtaacgagatccagagctggatgagagagaagaccaaggtg
atcgagtccaccgagagcctgggcaatgacctggctggtgtcatggccctgcagcgtaaa
ctcaccggcatggagagagacctggaggccattcagggtaagttggacgacctgaagaag
gaggcagagaagctggctgaggagcacccggaccaggcagaggagatccatgcccacctg
ggggagatccaggaagtgtggcaggagctcaacgccaccatgaagcggcgtgaggagtct
ctgggcgaggccagcaagctgcagggcttcctccgggacctggatgactttcagtcctgg
ctgtcccgcacacagaccgccgtggcgtccgaggacatccccacctcgctgccagaggct
gagggcctgctctcccagcacgagagcatcaagaacgaggtggacaactacaaggaggac
tatgagaagatgcgggcggtgggtgacgaggtgacccagggccaaacggacgcccagtac
atgttcctggcccagaggctgcagtcgctggacaccggctggcacgagctgcgccggatg
tgggagaaccgccacagccttctggcccaagccttcgacttccagagcttcctgagggac
gtcaagcaggctgagggtttcctcaacagccaggagtatgtgctgtcccacactgagatg
ccctccagcctgcagggggcagaggaggccatcaagaagcatgaggacttcctgaccacc
atggaggccagcgaggagaagatcacgggcgtggtagaggccggacgccgcctggtcaac
gaccttaacgccaactctgacaagatccaggagaaggccgactccatccaggagagacat
cagaagaatagggaagctgcaaatgaactcctgtctaaactgaaggacaaccgcgaactt
cagcacttcctgcaggacggacaggagctgactctgtggatcaatgagaagatgctgaca
gctcaggacatgtcgtacgacgaggccaggaacctccacagcaagtggcagaaacaccag
gccttcatggctgagctggcctccaacaaagactggctggataagatcgataaggagggc
caggccctggtgacagagaagccggagcttcagcctgtagtccagcaaactctggagggc
ctgcagagccaatgggaagagctagagaacactacacgcaccaaggctcagtgcctcttc
gatgccaacagggcagagctcttcacccagagctgctctgctctggacgtgtggctgaag
aacctgtcagggcagcttcagagcgacgacttcggcaaggacctgacctccgtcaacatc
ctgctcaagaagcaccagatgctggagcaccagatggaggtgcgtgagaaggaggtgcag
tcgctgcagtcccaggcgctggcgctgtcccaggaagatgctggtggggccgtggtggag
gtggacagccagcagagacgtgtcactgacagcttctcccagctccaggaccccctcaac
cagaggaggcaacagctgctggcttccaaggaggcccaccagttcaacagagacctggag
gatgagattctatgggtgaaggagaggatgcccctggccacatccacagaccatgggaag
gacttgtccagtgtgcagcttctcatcaagaagaaccagactttgcagaaggagatccag
ggccaccagccccgtatcgatgacatccagacccaccgcagggggatgtccccagggcag
gaggagatggacggggggaggcagtctgctctggagggccgtctggcggagctccgagac
tcctgggcccagctcatcgctgagacggacgagcgccacgcccggctggtggaggccaac
cgcgcccagcagttctacaccgacgctgccgaggccgaggcctggatgggagagcaggag
ctacacatgatgtcagaggagaaggccaaggatgagcagagtgctctggtgatggtgaag
aagcaccagacattagaacagaccctggaggactacgcccagcccatccaccagctggcc
aacagcagccgcaccatgatgaccagcgaacacccagagagcgagcgtatcaacctacgg
caagcccaggtggacaagctgtacgcggggctgaaggacctggctgaggagcgtcgtggg
cgtctgcaggagaggctgaggctgacccagctgaagagagaggtggacgacctggagcag
tggatcgctgagagggaggtggtggctggatcccatgagctgggacaggactacgaacat
gtcaccatgctgcgggacaagttccgggagtttgctcgggacacaagcaccatcggccag
gagcgcgtggacggcgttaacgggctggccgatgacctcatcgagtcgggtcaccctgag
aacgccagcgtggcggagtggaaggacggtctgaacgaggcgtgggccgacctgctggag
ctgatcgacacgcgcacccagatgctggccgcctcctacgagctgcaccgcttccaccaa
gacgcccgtgaggcgctggggagggtccgggagaagaaggaggcgctgccctctgacctg
ggccgtgacctcaacaccgtccagcacctccaccgacagcacaccgcctacgagcacgac
atccaggccctcagcggacaggtgaaccaggtgcaggacgacgcggcgcggctgcagaag
gcctacgccggggaaaaggccgaggagatccaccggagcgagcgttcggtcactgaagcc
tgggagggtctgctgggggccggccaggctcgccgacacgtcctgctggacaccgtggag
aagttccgcttcgtcaacatggtgcgtgacctcatgctgtggatggacggggtcaacctg
cagatcgacgcccacgacagccccagggacgtgtcctctgcagggttggtcatagccaac
catcaggacatcaagtctgagatcgagacccgggcagacagcttcaccacctgcattgag
atgggacactctctcatcaacaacaaccactatgcagctgatgagatcctggagaaactg
gaccagctccagggcaagagggacgagatcagcaacaagtggcaggacaagatggaccac
ctcctgatagttctggaggtgctgcagtttggccgggatgcgtgcgtggcagagacatgg
ctggcaggccaggagcccctggtgcggggggccgagctgggctctaacgtggacgaggtg
gagagcctgatcaaacgccacgaggccttcgagaagctggccgccggctgggaggaacgc
ttcaccctgctggagaaactcaccacgctggaggagcaggagatccagaggagggaggag
gaggagagggcgaggcgaacccccactccacccccgacagaagaggtggccccgtctgag
gccgaaacacatgatgccaggaccagcctagaccagaccacactgaaccagtcagtatca
gtgaatggagtccacagctaccaggacacctcccagtcgttatcagtatcatcagtgtca
gtggaaaagaaagagaagtgtgaacctgtctctaaacctgtgtctaagccaaagcatccg
ctgcgcggttctgagtccgactctgtgaatggtccggggagagacagcgggctggcgtct
tcacgcctggacccgtctgccacgctacccagcaagggagacgacgctggcacagacgcc
atggaaggcctgctctaccgcaagcaggagatggagacccacgccaagagggcagctagc
agcttctctctctcttcccataggtcctggcagaatgtctactgcgttctgcgtaagggc
agcctgggcttctacaaggaccagaagagcgcctccaacgggatcccctaccacggagaa
gtccccatcagcctgggagaggctgtgtgtgaggtggcgcacgactacaagaagaggaaa
cacgtcttcaagctacggctaggggatggtaaggagttcctgttccaagctaaagatgag
ccggagatggcctcgtggatccactccattcaaagctccatcccagcaggggggtcagga
gaccgctcccccggaggccccagggccctgagccgagccatgactatgccccccatctcc
ccaagctcagcagaggctgcaggggtcaccatgcgcaacaaggagggcaaggagaaggac
cgcgaaaagaggttcagcttctttggcaagaagaaataa
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integrated database retrieval system
