Salmo salar (Atlantic salmon): 106603224
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Entry
106603224 CDS
T04363
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106603224
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106603224
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
106603224
NCBI-ProteinID:
XP_014052058
UniProt:
A0A1S3RID6
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Position
ssa04:39293266..39295212
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AA seq
805 aa
AA seq
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MRKFKLKERSRLSDWRGQVLWLFSFFLSWNTTGAQIRYTVPEEFSVGSVLGNIAKDLDLD
VTEISDRKLRIASVAGKQYFRVNLGKGDLVVSDRIDRESLCGQSASCLLPLEVIVENPLK
LHRVEVEIKDINDNAPQFQSTERTLKIAESTAPGMRFSLESAQDPDVGDNSLKSYTLSKN
EHFSLEIKDQDDGRKVPELCLEKALDRETKARHQLLLTALDGGSPVRSGTSQIIIIVLDN
NDNNPIFKHPLGKVSLNENTPQGTSFLKVEANDLDDGPNGEIEYSFGDHTAQSVKTLFEI
DPKTGEMYLKGSLDYESTPSYRIEIIAKDKGMPEMEGQCNVQIDVIDVNDNSPQISLTSK
PSPVRENAPKGTVVALISARDPDSGDNGKVTLQIPPSYPFTLEPSISNHYALVTNGVLDR
ETFPEYSIEITATDAGSPPLTSKKTIPVRILDVNDNPPRFPDTAYTVYINENNTPGYIIC
SVSALDMDFGDNAKISYSILDSKVQDVSVSSYIYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDHGSPSLSSNVTVHVFILDQNDNAPAVIYPSAVMGSVSHQKMPRSAKVGHLTTKISA
VDADSGHNAWISYRLVEATDSSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDNGEPV
QSATVTVNILLEDGLHEPISDFRQKTAEPSKRNSKITFYLIISLASVSVLSLLTFLILVV
KCVRNSRSSSSCCIRRADSDGYKNPNRNLQLQLNTDGPIKYVEVLGGDMLSQSQSFRSCL
SPVSEFSDFTLVKPSSTTDFKDMIN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattcaaattgaaagagaggtcgcgcctgagcgattggagaggacaagtgcta
tggctgttcagtttctttttgtcttggaatacaacaggagcacagattcgttacactgtt
ccagaggaatttagcgtgggatccgtgcttggcaatatagctaaagatctagatttggat
gtaactgagatttctgatcgtaagttgaggatagcctccgtggctggtaagcagtatttc
cgtgtgaatttgggtaagggcgacctggttgtgagcgatagaattgacagagaaagtctg
tgcggacaaagcgccagttgtctcttgccattagaagtcatcgttgagaatcctctaaag
ctccacagagtggaagttgaaattaaggatataaatgacaatgctccacaatttcaatca
acagagcggacattgaaaatcgcagaatctacggctcctggtatgcgcttttctttggag
agcgcgcaggatcctgacgttggcgataattctttaaaatcgtatactctcagcaaaaac
gaacatttcagcttggaaataaaggatcaagatgacggaagaaaagttccggaattatgt
ctggagaaagctttggaccgagagactaaggctcgacatcagctgttgttaaccgccctg
gatggtggctctccagttagatctgggacctcacagattataattattgtcttagataac
aacgataacaaccccatattcaaacatccgttaggcaaagtatctctaaacgaaaacact
ccacagggcacgtctttcctgaaggtcgaggcaaacgatttggacgatggcccaaatgga
gagatcgaatactcttttggtgaccatactgcacagtctgtaaagactttgtttgaaatt
gatccaaaaacgggggaaatgtatttgaagggttcgctggattacgagagcactccctcg
taccgaatcgaaattattgctaaagacaaaggcatgcctgagatggaaggacagtgcaac
gttcagattgatgtcatagatgtcaatgataactctccccaaattagcctcacatctaaa
ccaagcccagtgcgcgagaacgcacccaaagggactgtagtggctttgattagtgcacgg
gaccctgactctggagacaatggaaaggtgacactacaaatcccaccaagctatcctttt
acattggaaccttccatctccaatcattacgcactagtcaccaatggtgttctggaccgt
gagacgttcccagagtatagcattgagataacggctactgatgcgggctccccccctctc
accagcaagaaaaccatcccagtccgtattttggatgtaaatgacaatccacctaggttt
ccagacactgcgtacactgtgtacatcaatgagaataacacacctggttatattatttgc
tccgtgtccgcattggatatggattttggagataacgccaagatctcctattctatatta
gactctaaagtacaagacgtgtctgtctcctcctatatttacatcaactcagataacggc
agcatctacagcatgcactcgtttgactatgagaaactgaaggtgtttcagatacaggtg
caggcaaaggaccacggctctccgtctctgagcagcaacgtcacggttcatgtttttatc
ctggaccagaacgacaatgcccccgctgttatttacccttccgctgtcatgggctctgtc
tcccatcagaagatgccccggtccgctaaagtaggccacctcaccactaagatatcggca
gtggacgcagactcgggccataacgcctggatttcctataggctggtggaggccacagac
tcgtctctgttcagtgtgaatctttacacaggggaggtgaggactaaacgcgctgtttca
gagcaggatgactcctctcagaggctgcttatagagatacaggacaatggggagccggtc
cagtccgccacagtcacagtcaacatactgttagaggacgggctccacgagcccatctcg
gacttccgccagaaaacagcagagcccagcaagagaaacagtaaaatcaccttttatttg
ataatctctctggcctcagtgtccgttttgtctttgttgactttcctcatcttagtggtg
aagtgcgttagaaacagtaggagcagctcgagttgctgtatcagacgggctgattctgac
ggatacaagaatccaaacagaaacctgcagctccagctcaacactgacggccctattaag
tatgtggaggtcctgggaggggacatgttgtctcagagccagtccttcaggtcgtgtctc
tctccagtgtccgagttcagtgatttcaccctcgttaagcccagcagcaccacagacttt
aaggacatgataaac
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