KEGG   Salmo salar (Atlantic salmon): 106603224
Entry
106603224         CDS       T04363                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sasa04515]
    106603224
Cell adhesion molecules [BR:sasa04515]
 Cadherins
  Protocadherins
   106603224
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th RET_CLD1
Other DBs
NCBI-GeneID: 106603224
NCBI-ProteinID: XP_014052058
UniProt: A0A1S3RID6
LinkDB
Position
ssa04:39293266..39295212
AA seq 805 aa
MRKFKLKERSRLSDWRGQVLWLFSFFLSWNTTGAQIRYTVPEEFSVGSVLGNIAKDLDLD
VTEISDRKLRIASVAGKQYFRVNLGKGDLVVSDRIDRESLCGQSASCLLPLEVIVENPLK
LHRVEVEIKDINDNAPQFQSTERTLKIAESTAPGMRFSLESAQDPDVGDNSLKSYTLSKN
EHFSLEIKDQDDGRKVPELCLEKALDRETKARHQLLLTALDGGSPVRSGTSQIIIIVLDN
NDNNPIFKHPLGKVSLNENTPQGTSFLKVEANDLDDGPNGEIEYSFGDHTAQSVKTLFEI
DPKTGEMYLKGSLDYESTPSYRIEIIAKDKGMPEMEGQCNVQIDVIDVNDNSPQISLTSK
PSPVRENAPKGTVVALISARDPDSGDNGKVTLQIPPSYPFTLEPSISNHYALVTNGVLDR
ETFPEYSIEITATDAGSPPLTSKKTIPVRILDVNDNPPRFPDTAYTVYINENNTPGYIIC
SVSALDMDFGDNAKISYSILDSKVQDVSVSSYIYINSDNGSIYSMHSFDYEKLKVFQIQV
QAKDHGSPSLSSNVTVHVFILDQNDNAPAVIYPSAVMGSVSHQKMPRSAKVGHLTTKISA
VDADSGHNAWISYRLVEATDSSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDNGEPV
QSATVTVNILLEDGLHEPISDFRQKTAEPSKRNSKITFYLIISLASVSVLSLLTFLILVV
KCVRNSRSSSSCCIRRADSDGYKNPNRNLQLQLNTDGPIKYVEVLGGDMLSQSQSFRSCL
SPVSEFSDFTLVKPSSTTDFKDMIN
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgaggaaattcaaattgaaagagaggtcgcgcctgagcgattggagaggacaagtgcta
tggctgttcagtttctttttgtcttggaatacaacaggagcacagattcgttacactgtt
ccagaggaatttagcgtgggatccgtgcttggcaatatagctaaagatctagatttggat
gtaactgagatttctgatcgtaagttgaggatagcctccgtggctggtaagcagtatttc
cgtgtgaatttgggtaagggcgacctggttgtgagcgatagaattgacagagaaagtctg
tgcggacaaagcgccagttgtctcttgccattagaagtcatcgttgagaatcctctaaag
ctccacagagtggaagttgaaattaaggatataaatgacaatgctccacaatttcaatca
acagagcggacattgaaaatcgcagaatctacggctcctggtatgcgcttttctttggag
agcgcgcaggatcctgacgttggcgataattctttaaaatcgtatactctcagcaaaaac
gaacatttcagcttggaaataaaggatcaagatgacggaagaaaagttccggaattatgt
ctggagaaagctttggaccgagagactaaggctcgacatcagctgttgttaaccgccctg
gatggtggctctccagttagatctgggacctcacagattataattattgtcttagataac
aacgataacaaccccatattcaaacatccgttaggcaaagtatctctaaacgaaaacact
ccacagggcacgtctttcctgaaggtcgaggcaaacgatttggacgatggcccaaatgga
gagatcgaatactcttttggtgaccatactgcacagtctgtaaagactttgtttgaaatt
gatccaaaaacgggggaaatgtatttgaagggttcgctggattacgagagcactccctcg
taccgaatcgaaattattgctaaagacaaaggcatgcctgagatggaaggacagtgcaac
gttcagattgatgtcatagatgtcaatgataactctccccaaattagcctcacatctaaa
ccaagcccagtgcgcgagaacgcacccaaagggactgtagtggctttgattagtgcacgg
gaccctgactctggagacaatggaaaggtgacactacaaatcccaccaagctatcctttt
acattggaaccttccatctccaatcattacgcactagtcaccaatggtgttctggaccgt
gagacgttcccagagtatagcattgagataacggctactgatgcgggctccccccctctc
accagcaagaaaaccatcccagtccgtattttggatgtaaatgacaatccacctaggttt
ccagacactgcgtacactgtgtacatcaatgagaataacacacctggttatattatttgc
tccgtgtccgcattggatatggattttggagataacgccaagatctcctattctatatta
gactctaaagtacaagacgtgtctgtctcctcctatatttacatcaactcagataacggc
agcatctacagcatgcactcgtttgactatgagaaactgaaggtgtttcagatacaggtg
caggcaaaggaccacggctctccgtctctgagcagcaacgtcacggttcatgtttttatc
ctggaccagaacgacaatgcccccgctgttatttacccttccgctgtcatgggctctgtc
tcccatcagaagatgccccggtccgctaaagtaggccacctcaccactaagatatcggca
gtggacgcagactcgggccataacgcctggatttcctataggctggtggaggccacagac
tcgtctctgttcagtgtgaatctttacacaggggaggtgaggactaaacgcgctgtttca
gagcaggatgactcctctcagaggctgcttatagagatacaggacaatggggagccggtc
cagtccgccacagtcacagtcaacatactgttagaggacgggctccacgagcccatctcg
gacttccgccagaaaacagcagagcccagcaagagaaacagtaaaatcaccttttatttg
ataatctctctggcctcagtgtccgttttgtctttgttgactttcctcatcttagtggtg
aagtgcgttagaaacagtaggagcagctcgagttgctgtatcagacgggctgattctgac
ggatacaagaatccaaacagaaacctgcagctccagctcaacactgacggccctattaag
tatgtggaggtcctgggaggggacatgttgtctcagagccagtccttcaggtcgtgtctc
tctccagtgtccgagttcagtgatttcaccctcgttaagcccagcagcaccacagacttt
aaggacatgataaac

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