KEGG   Salmo salar (Atlantic salmon): 106604673
Entry
106604673         CDS       T04363                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    106604673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106604673
   04121 Ubiquitin system [BR:sasa04121]
    106604673
   03036 Chromosome and associated proteins [BR:sasa03036]
    106604673
Enzymes [BR:sasa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     106604673
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    106604673
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     106604673
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106604673
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     106604673
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like SR-25 JmjC F-box Cupin_8
Other DBs
NCBI-GeneID: 106604673
NCBI-ProteinID: XP_014055044
UniProt: A0A1S3RRW0
LinkDB
Position
ssa05:30491803..30503762
AA seq 1337 aa
MEDQNPRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLDEKLQSDRFNSYLVKHMDGKDF
TFEYIQREGLRDPIVFEKKDGLGLEMPDSDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MAQWRRYYETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNTSHLTPDFQKHSLGVG
LTREDSENKLNGHVKNGTEEKKEGDDDEEEKEESETKVKMEESDDDSFPLPGATKPEVRV
NLTPLELEGLWNLLGKLEELPAHKKCVPAGIRNAPALLHDIRALLEEHCNDDPKLSYTGK
PIVKWPKRPSWYQPPPPSVVYRPRLAMPHKAVVPRRAKPTSISALRRRRVRCKHCAACQR
KECGECNFCKDMRRFGGPGRMKKGCMMRQCLAPGLPNSAVCALCGAGQGKQECSDASPSS
TTLMECSNCAQIAHPDCIKVPGVGRINKDLPSCWECPKCYQGKEGPSSESSSSDEDSTAS
TGSLSTSNHVHREGLGDGEAGGGMRKGRRGRPPLTSSLSQRRAPPPSQRLLLQQQQNRKR
AGALELRLRKRIKLERSKILQSKQMLSLERSPKLLCSQGLAHLQRGVSSRLRSPVGRLSR
GRGSFRGSSYRSPTGARLQPPQPSLSLAPAGRGEGHRERGSGRGVRLRGAAAGRGRRGQR
HGGAEEESDSSSSSSSSSSSSSSSSSSSSSSSDEERENGVRTRRNKENRPQRRGSGAAKE
DEEESEESNQNGEEMDEDWREGGQAQTEPPVLVVSDLSDDLMKGSYLTVTLQPSRAKRDP
GAIVPKLEAAVAPRPAPPGQSCIQRKNLARPPLRNHAPDPYAAPSHSDTHTHTRGSSTHT
RGSHPDERRMRPGRPERTDNSASSSPVPLRLPLSALQDGGREVANGGSEPGCEREVWVSV
FRYLTRTELCVCMAVCKNWHKWSLDKRLWMRIDLSVSKSISPQALSGIIKRQPVTLDLSW
TSISKKQLTWLINRLPGLKDLMLSGCSWSSISALSSPSCPLLRTLDLRWADGIKDGQIRD
LLNPPGCDNRSQLRNMQSFRLAGLEISDCTLRLVIRHMPLLTRLDLSHCGGLTDQSINLL
TAVGSSTRNTLTELNLGGCSKLTDSCLRYLRRLSCLSLLDLRECKSVSRKACEAFISELS
VNTLYCLSEDKLIQRIS
NT seq 4014 nt   +upstreamnt  +downstreamnt
atggaagaccaaaaccctcgttacagcaagcgcttgcgtacggggacgcggcggcgctac
caggatgacgggatctcggacgatgagattgaggggaagaggacgtttgacctggatgag
aagctccagagtgacaggttcaactcctacctggttaaacacatggatggaaaagacttc
acattcgagtacatccagagggaggggctgagagaccctatcgtctttgagaaaaaagat
ggccttggcttagagatgccagactctgatttcagtgtgagtgatgtcaagctgtttgta
ggcagtcggcggatggttgacgttatggatgtgaccactcagaagggcatcgagatgtcc
atggcccaatggcggcggtactacgagaccccgccctcggagcgagataagctctataac
gtcatcagcctggagttcagtcacaccaagctggagaacctggtgaaacgacccgcctcg
gtggatttgatagactgggtggacaacatgtggccaaggcatctaaaggagagacagaga
gactcaaccaactccataatagaaatgcagtatcccaaagtgcagaagtactgtctgatg
agtgtccagggctgcttcacagacttccacgttgactttggcggaacgtcggtctggtac
cacatcctgcgggggggaaaggtgttctggctgatcccgcccacaccccagaacttggag
ctgtatgagaactgggtgttgtcagggaaacagggagacattttcctgggggacaaggcc
caggactgtcagaggatagaactgaagcagggatacaccttcatgatcccctctggctgg
atccatgctgtgtacacccctgaggacacactggtgtttggaggaaacttcctccacagc
ttcaacatccccatgcagctcaacatctacaacattgaggaccgcacacgagtcccggct
aagttccgataccccttctactatgagatgtgctggtacgtgttggaaagatacctctac
tgcctgaccaacacctcccacctcacccccgacttccagaagcactcgcttggcgttggt
ctgacccgtgaagactcggagaacaaactcaacggccacgtgaaaaacggcacagaggaa
aagaaagagggagacgatgatgaggaagaaaaggaggaaagtgagaccaaggtcaaaatg
gaagagtctgatgacgattccttcccccttcctggtgccactaagccggaggtgagagta
aacctgactcccctggagctggaggggctgtggaacctgctggggaagctggaggagctg
ccggcccacaaaaagtgtgtccccgcaggcatccgtaatgcccccgccctgctccatgac
atacgggctcttctggaggaacactgcaacgatgaccccaagctgtcttacaccggaaag
cccatcgtcaagtggcccaagaggccctcgtggtaccagccccctcccccctcagtggta
taccgtcctcgtctcgccatgccccacaaggccgtggtccctcgccgtgccaagcccacc
tctatctcggctctgagacggaggcgcgtgcgctgcaaacactgtgcagcctgccagagg
aaggagtgcggcgaatgcaacttctgcaaagatatgaggaggttcggaggacccgggcgc
atgaagaagggctgcatgatgcggcagtgtctcgctcctggcctgcctaactcagcggtg
tgtgctctgtgtggagcgggccaggggaagcaggagtgttcagacgcaagcccctcctcc
acaaccctcatggaatgctccaactgtgctcagattgcccaccccgactgcatcaaggtt
cctggggtgggcaggatcaataaggacctgcccagctgctgggagtgtcccaaatgttac
cagggcaaagaaggcccctcatcggagtcatccagcagtgatgaggacagcacggcgtct
acaggttctctctctacgtcaaatcatgtccaccgagaggggttaggagatggggaggca
ggcggtgggatgaggaagggacgacgcggcagaccccccctgacgtcctctctgtcccag
cggagagcgccccctccctctcagcggctgttactgcagcaacaacaaaaccggaagaga
gctggagcgctggagttaagactcaggaagaggatcaaactggagcgcagcaaaatctta
caatcgaagcagatgttgtctctggagcgttctcctaagctcctgtgctcccagggtcta
gcccacctccagagaggggtgtcttctcgcctccgctcccctgttggcagactgtcccgg
ggccgtgggtccttcagaggctcctcttaccgctcccctacaggggctcgcctgcagccc
ccccaaccctccctcagcctggcccccgcaggcaggggagaggggcacagggagcgaggg
agtgggagaggagtacggctcagaggagcagcagcagggagaggaagaagaggacagaga
cacggaggagcagaggaagagagtgatagcagcagtagtagcagcagcagcagcagcagc
agtagtagtagtagtagtagtagtagtagtagtagtgatgaggagagggagaacggcgtg
cggaccagacggaacaaagagaaccgaccacagagacgaggaagcggagcagccaaagaa
gatgaggaagagagtgaggagtccaaccaaaacggagaagagatggatgaagactggagg
gaaggaggacaggcacagacggagccaccggtcctcgtagtgtcggaccttagcgacgac
ctcatgaagggctcgtatctcacagtaaccctacagccgtcgagggccaaacgtgatccg
ggggccattgtcccgaaactggaggctgcagtcgccccccgccctgcccctcctggccag
agttgcatccaacgcaagaacctggcccgaccacccctcaggaaccacgccccagaccct
tacgctgcaccctcgcactcagacacacacacacacaccaggggcagcagtacacacaca
cggggctcccatccagacgagaggagaatgaggccaggcagaccagagagaacagacaac
agcgcttcctcctctcctgttcctctacgcctccctctgtcggctttacaggatgggggg
agggaggtggcgaatggagggagcgagccgggctgtgagagggaggtgtgggtatctgtc
ttccgctacctgactcgtaccgagctctgtgtctgcatggctgtctgcaagaactggcac
aaatggagcttggataagaggctgtggatgcggatcgatctgagcgtgtctaaatccatc
agtcctcaggctctgtcaggtattatcaaacgccaaccagtcaccctggacctctcctgg
acctccatctccaagaaacaactcacctggctcatcaaccgcctgcctgggttgaaggat
ctcatgttgtctggctgttcctggtcttcaatttcggctcttagctcgcccagttgcccc
ctcctgcgcacactggaccttcggtgggccgacgggatcaaagacggacagattagggac
ctgctcaacccaccaggttgtgataaccgcagtcagctgaggaacatgcagtctttccgt
ctggcggggctggagatcagtgactgtactctgaggctggtgatcagacacatgcccctg
ctgacccgtctggacctatcccactgtggaggcctcactgaccagtccatcaacctgctc
actgctgtgggctcctccacacgcaacacactcaccgagctcaacctggggggctgcagt
aagctgacagactcgtgtctgcggtacctccgccggctttcctgcctctccctgctggac
ctgcgggaatgcaagagtgtctcccgcaaagcctgcgaggccttcatctctgagctgtct
gtcaacaccctctactgcctatctgaagacaaactgatccagaggatatcctag

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