Salmo salar (Atlantic salmon): 106604876
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Entry
106604876 CDS
T04363
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106604876
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Protocadherins
106604876
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
106604876
NCBI-ProteinID:
XP_014055442
UniProt:
A0A1S3RUB9
LinkDB
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Position
ssa05:35681044..35851942
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AA seq
974 aa
AA seq
DB search
MESRQRKGYGGWPVLRLWFSLACFTGATAQLSYSISEELRPGAVVGNIAKDLGLTVQRII
QRKLRVISESNAQYFEVNHATGDLVIRQTIDREHMCELSSTCSLHLQIVLEDPLAIHRVL
VDIVDANDNAPQFSTKNISLEISEAAAPGTRFRLESAHDPDVGINSLRTYHLAPNDCFVL
NVETKSDGSKFPELVLEKALDRETQASFRLLLTAVDGGKPEKSGSTLLLIKILDVNDNAP
VFEEPVKKVSILENVEPGTLVTKLNATDADYGQNGQISFLFSKYTQDRVLKLFSVDSKTG
EIRVNGQVDYETANEYHITVQARDGGTPAMEGSCNIIVDVTDVNDNSPEVTLTSLTSPIR
EDAAPGTVIALISARDLDSGKNGEVTLKVQSGLPFKLNSAFGEHYNLVTDGDLDRETMAE
YTVVIMATDAGSPPLSSRTTFVVRLSDVNDNAPSFSQPSYSVDVPENNAPSTPITMVTAS
DPDTGDNARVSFTILPSMVQGSPVSSYVYINPETGHIYSMRSLDHETLNVFRIEVQARDA
GAPPRTANVTVHVFVVDLNDNAPLIVYPPFPQDTGLLLSVPQSAGPGHLINKLVGVDPDS
GHNAWLFYSIAPGPHAGLFRIAPHTGELRTARKLAEEEGGSAYDITVVVQDNGEPTLSTT
VAITVTVEEKGASDAAADNRKTSAMRRTGMPDITLYLIISLACVSAVFFLTFLILMVRCL
HQRSDLGGTGCCYSRHRPSRPHHQRPSKDLHLQLNTDGPIRYMEVVGGAQDPPGTRTYRP
CYSTISSRSDFVFVKTPMMSHNNTLSMTLNRKHLMNSAIEQKPPNADWRFTQGQRPGPSG
AGGPPEMAMGTGPWPNPPTEAEQLQALMAAANEVSEATATLGPGTMGLSTRYSPQFTLQH
VPDYRQNVYIPGSTATLTSNPQQQQQQQMLMQQQMAAQHQALQAQPSEAAAQPEPPKPAQ
TPASKKKSTKKEKK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagacagaggaaaggctacggagggtggccagtgctgaggctatggttttct
ctggcgtgctttacaggcgcgaccgcgcagctcagttactcgatttccgaggagcttcga
cccggggctgtggtcgggaatatcgctaaggatttgggcctcacggttcagaggataatt
cagagaaaattgcgggtgatctcggaatctaacgcgcagtacttcgaggtaaaccatgcg
actggggatttggttattagacagacaattgacagggagcacatgtgcgaattaagttca
acatgttcactacatcttcagattgtactcgaggaccctttagcaatacatcgggttctt
gtggatattgtggatgcgaatgacaatgcgccgcagttttccactaagaatatttccttg
gagatatcagaggcggccgcgccgggcactcggttccgactggagagtgcgcacgaccca
gatgtgggtatcaactctctccgcacttatcacctcgcacccaacgactgctttgttttg
aatgtggaaacgaaaagtgacgggagtaagttcccggaattagttttagagaaggctttg
gatagggagacgcaggcctcgtttcgcctgttgctcaccgcggtagacgggggaaagccg
gagaagtctgggtccactcttttactcataaaaattctggatgtcaatgacaatgcgccc
gtctttgaagagccggtgaaaaaagttagcattttggagaatgttgaaccgggcacttta
gtaacgaaactgaacgcgaccgatgcggattacggtcagaatgggcagatctccttcctg
tttagtaaatacacgcaggaccgggtgctcaagctattcagcgtggattctaaaaccggg
gagatccgtgtgaatggccaggtggactatgagacagcgaatgaatatcacatcaccgtg
caggcccgggatgggggaacccccgccatggagggttcctgtaacatcatagttgacgtc
actgacgtgaatgacaattctccagaggtaacgttgacgtcactgaccagtcccatcaga
gaggacgcagctcctggtacagtcatcgccctcatcagtgcgagggacctggactctggt
aagaatggggaggtgacgttaaaggtccagtccggcctgcccttcaaactcaactctgcc
tttggtgagcactacaatctggtcacggatggcgacctggaccgagagaccatggcagag
tacactgtggtcatcatggcgaccgacgcgggctcccctcccctgtcgtcgcggacgacc
ttcgtggtgaggctatcagatgtgaacgacaacgcgccctcattctcccagccctcctac
tcagtggacgtccccgagaacaacgctcccagcacccccatcaccatggtgacggcctct
gacccggacacaggggacaacgcccgcgtctccttcaccatcctgcccagcatggttcag
ggttcccccgtgtcctcctatgtgtacatcaacccagagaccggacacatctacagcatg
cgttccctagaccacgaaaccctcaacgtcttccgtatcgaggtgcaggcccgagacgcc
ggggcgccaccccggaccgctaacgtcacggtgcatgtgttcgtagtggatcttaacgac
aacgcgcccctcatcgtgtacccccccttcccccaggacacggggctgctgctgagtgta
ccccagtcggctgggccaggccatctcattaataaactagtaggggtggaccctgatagt
ggacataacgcctggctgttctactccatcgccccagggccacacgccggtctcttccgc
atcgccccccacaccggggagctccgcactgcccgcaaactagccgaggaggagggcggc
tccgcctacgacatcaccgtggtcgtccaggacaacggcgagcccactctctccaccact
gtggccatcacggtaaccgtggaggagaagggcgccagcgacgccgccgcggacaaccgg
aagacgtctgcgatgcgtcgcaccggcatgcccgacatcaccctgtacctcatcatctcg
ctggcctgcgtctcggccgtgttcttcctcaccttcctcatcctcatggtgcgatgcctc
caccagcgcagcgacctcggagggacaggctgctgctacagccgccaccggcccagcagg
ccccaccatcagagacccagcaaggacctccacctgcagctcaacacagacggacccatc
cgttacatggaggtggtgggaggggctcaggaccccccagggacacggacctacagaccc
tgctactccaccatctccagccgaagtgactttgtgtttgtcaagacgcccatgatgagt
cacaacaacaccctcagcatgacactcaacaggaagcacctaatgaactcagccattgag
caaaagcctcctaacgccgactggcgcttcacccaaggacagagacctggacccagtggg
gctggaggtccccctgagatggccatgggaacaggaccctggcccaacccccccactgag
gccgagcagctccaagccctgatggccgcagccaacgaagtgagcgaggcgactgcaacc
ctgggaccgggcaccatgggactcagcacccgttacagcccccagttcaccctgcagcac
gtgcccgactaccgtcagaatgtctacatccctggcagcacggccaccttgacctccaac
ccccagcagcagcagcagcagcagatgctgatgcagcagcagatggcagcccaacatcag
gccctgcaggcccagccctctgaggccgccgctcagcctgaaccccccaagcctgcccag
acccccgcctccaagaagaagtccaccaagaaggagaagaagtag
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