KEGG   Salmo salar (Atlantic salmon): 106605250
Entry
106605250         CDS       T04363                                 
Name
(RefSeq) rano class II histocompatibility antigen, B alpha chain-like
  KO
K06752  MHC class II antigen
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04145  Phagosome
sasa04514  Cell adhesion molecules
sasa04672  Intestinal immune network for IgA production
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    106605250
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106605250
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    106605250
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106605250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106605250
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106605250
  Exosomal proteins of epithelial cells
   106605250
  Exosomal proteins of breast milk
   106605250
SSDB
Motif
Pfam: C1-set Ig_2 Ig_3 ig I-set V-set
Other DBs
NCBI-GeneID: 106605250
NCBI-ProteinID: XP_014056167
UniProt: A0A1S3RWC3
LinkDB
Position
ssa05:complement(55559770..55568747)
AA seq 212 aa
MNSFVCLKILVPPWWRSGLRCLVQQIGLVCFFMNSGAFSPLVQFVWTGVNTVLTRERPTE
APTSHIYSQREVELGDPNTLICRVSDFHPTSVDVTWTRNEQPVGEGTVSLTQYYSNENFS
FRIFSYLSITPQEGDIYSCSVGHVSLQEPLTRIWEVEVHTDHQTVETAVCVGGVTLGVVG
VATGSQEVWLGLKNIGNYQQYTKGSMQQYQGS
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaacagctttgtatgccttaaaattctagttccaccctggtggcgaagtggactacgg
tgtcttgtacagcaaattggtttggtatgtttttttatgaactctggtgcatttagcccc
ttagttcagttcgtttggactggtgtgaacactgtcctcactcgggagcgcccaacagag
gctcccacctcccacatatactcccagagagaggtggaactgggggaccccaacacactc
atctgccgggtcagtgatttccacccaacatccgtggatgtgacttggaccaggaacgag
cagccggtgggagaggggaccgtcagtctgacccagtactactccaatgaaaacttcagc
ttcaggatcttctcctacctgagcatcacacctcaggagggggacatctactcctgtagt
gtggggcacgtcagcctgcaggaacccctcaccaggatctgggaggttgaagtgcacacg
gaccaccagactgtggagacagcagtgtgtgttggaggtgtgactctaggagtggtggga
gtagcaacaggaagccaagaggtctggttgggccttaagaacataggcaactatcagcaa
tacaccaagggctccatgcaacaataccaaggctcctag

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