Salmo salar (Atlantic salmon): 106607045
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Entry
106607045 CDS
T04363
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03272
Virion - Hepatitis viruses
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106607045
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106607045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106607045
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106607045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Psg1
Motif
Other DBs
NCBI-GeneID:
106607045
NCBI-ProteinID:
XP_014059079
UniProt:
A0A1S3S4A3
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All DBs
Position
ssa06:complement(29829870..29841199)
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AA seq
880 aa
AA seq
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MGRLLCVLLVFLACCVVQTNAETVCGIRQFLCGNGKCITLRWVCDDTDDCGDGTDELPGT
CSARTCRTTEFSCGGRLNQCVPSTWLCDGKADCANGADEESCAPKHCTDNKFRCSNGQCV
SASFVCDEELDCDDGSDEASCPPSACSSTSFQCNNSVCVPRLWACDGDADCSDGSDEWPQ
NCGTRAPEGAPKPCSLREFQCGSGECIHSSWKCDGGFDCLDRSDETNCSRLTCRPDEFQC
GDGTCIHGGRQCNRQYDCRDLSDEIGCVNVSHCKGPTRFKCRSGECISMEKVCDKQRDCR
DWSDEPLRECDSNECLYNNGGCSHICNDLKFGYECQCPAGYYLTDKKRCEDIDECANPDI
CSQICVNHMGSYKCECEEGYQVDPATKACKAIGTVAYLFFTNRHEVRKMTLDKSEYTRVI
PRLKNAVALDMNMVAKEIYWSDLSQKKIYSTSMDLAADTAQHKVVIDSDIEAPEGIAFDW
VHGNIYWTDSILSSISVSTANGSRRKTLFQNDLAKPRAIVVDPHSNFMYWTDWGTPAKIE
KGGLNGGDRAALVTDDIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIIDEH
RLAHPLGITVFEERVFWTDVSNNAILSANRVTGRDIKPVAEHLVSPEDIVLYHNLKQPTG
RDWCKVANGGCEFMCLAAPQVGIHSPKYTCACPDNMLLAKDMRKCVPAAPTPAAPVKPIV
PAPNPPPAPAHTSPAPPARATTKAPIIATTVTPAPPRTTKPVPRNPQPAQPDRPRIPQAQ
TTTVPQVTTQDIRHEFAAIPTAPSTPAALYIALPIAIVCLVAFGAVLLWRNYRLKNTSTI
HFENPVYQKTTEDQVHICRSHSPDGYSYPPRQIVSLDDEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctgctgtgcgtgctgttggtgttcctggcttgctgtgttgtccaaacaaac
gcagagacagtatgtgggatcaggcagttcctgtgtgggaacgggaagtgcattacgctg
agatgggtgtgtgatgacacagatgattgtggagatggaactgatgagctccccggaacc
tgctcggccagaacatgcagaaccacagagtttagctgtggtggacgtctgaaccagtgt
gttcccagtacctggctctgtgacggcaaagccgactgtgcgaatggagctgatgaggag
agctgtgcgcccaagcactgcacagataacaaattccgctgcagtaacggccagtgtgtg
tcggcctcctttgtgtgtgatgaggagttggactgtgatgacgggagcgacgaggcttcc
tgcccacccagcgcctgtagctccacctccttccagtgcaacaactctgtgtgtgtgccg
cgcctgtgggcctgcgacggggacgctgactgctcggatggctccgacgagtggccccag
aactgtgggacgcgagcccctgagggtgcccccaagccctgctcccttcgggagttccaa
tgtggcagcggggagtgtatccacagcagctggaaatgtgatggagggttcgactgcctg
gatcgctctgacgagaccaactgtagccgcctcacctgccgccccgatgagttccaatgc
ggtgatggcacctgtatccacggcggccgccaatgtaaccgccagtacgactgcagagac
ttgagtgatgaaataggctgtgtcaatgtgagccattgcaagggtcccaccaggtttaag
tgccgtagtggggagtgcatcagtatggagaaggtgtgtgacaagcagcgtgactgcagg
gactggtcagatgagcctctcagagagtgtgattccaacgagtgcctgtacaacaatggc
ggctgctcacacatctgcaatgacctgaagttcggctatgagtgccaatgccccgccggc
tactacctgacggacaagaaacgctgtgaagatatcgatgagtgtgccaacccagacatc
tgcagccagatctgtgtcaatcatatgggcagctacaagtgcgagtgtgaggagggctac
caggtcgacccagccaccaaagcctgcaaggccatcggcactgtagcctatctgttcttc
accaatcgccatgaggtgaggaagatgacactggacaagagtgagtacacgcgtgtcatc
ccccgcctgaagaatgcagtggctctggacatgaacatggttgccaaggagatttactgg
tctgacctctcccagaagaagatctacagcacctcaatggacttggctgcagacacagcg
cagcacaaagttgtgattgacagcgacatcgaagctccggagggcatcgcctttgactgg
gtccacggcaacatctactggaccgacagtatcctcagcagcatctccgtgtcaaccgcc
aacgggagccgccgcaagactctcttccagaatgacctggccaagccccgcgctattgtg
gtcgacccccacagcaacttcatgtactggactgactggggaactccagccaagattgag
aagggaggtctgaacggaggagaccgtgctgctctggtcacagacgacattgtgtggccc
aatggaatcacacttgacctgctgaaccagcggctgtactgggtggactccaagctgcac
accctctccagtatcgacgtccagggtggtggccgaaggacactcattatagatgaacac
aggctagcccatcccctaggcatcactgtgtttgaggaaagagtgttttggacagatgtc
agcaacaatgccattctgagtgccaaccgtgtgacaggcagggacatcaagcctgtggca
gagcacctggtatccccagaggacattgtgttgtaccacaacctcaaacagccaactggc
agggactggtgcaaggtggccaacggaggctgtgagttcatgtgtctggcagccccccag
gtgggcatacattcccccaagtacacctgtgcatgccctgacaacatgctgctggccaaa
gacatgaggaaatgtgtaccagctgcaccaacacctgcagctccagtcaagcccattgtt
cccgcccccaaccccccaccggcacccgcccacacctcccctgcacctccagcccgcgcc
accactaaggcccccatcatcgctaccacagttacgcctgcgcctccccgcactaccaag
cctgtgccacgcaacccccagcctgcccagccagatagacccaggatcccccaggcccag
actaccacagtgcctcaagtcaccactcaggacatccgccatgaatttgctgctataccc
acagccccttcaacccctgcagctttatacatcgcgctgcctatagccattgtgtgtctg
gtggcctttggtgccgtgctgctgtggaggaactacaggctgaagaacactagcaccatt
cactttgaaaacccagtctaccagaagaccactgaagaccaggtgcacatatgcaggagc
cacagtccagacggctactcctacccaccgagacagattgtgagtcttgatgatgaggct
tga
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