Salmo salar (Atlantic salmon): 106608163 Help Entry 106608163         CDS       T04363                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04115   p53 signaling pathway sasa04145   Phagosome sasa04148   Efferocytosis sasa04350   TGF-beta signaling pathway sasa04510   Focal adhesion sasa04512   ECM-receptor interaction sasa04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sasa00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     106608163   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106608163  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     106608163    04148 Efferocytosis     106608163   09143 Cell growth and death    04115 p53 signaling pathway     106608163   09144 Cellular community - eukaryotes    04510 Focal adhesion     106608163   09142 Cell motility    04820 Cytoskeleton in muscle cells     106608163  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sasa04131]     106608163   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sasa00536]     106608163 Membrane trafficking [BR:sasa04131]  Endocytosis   Phagocytosis    Opsonins     106608163 Glycosaminoglycan binding proteins [BR:sasa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106608163 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C TSP1_ADAMTS EGF_3 Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  106608163 NCBI-ProteinID:  XP_014061410 UniProt:  A0A1S3SAS4 LinkDB All DBs Position ssa06:75999694..76017574 Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLLTCESVRVAENRDDNSVYDLFELVQVSKKNHGVTLVKGDDPYSPAYKI LNPDLIPELPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPATARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSVLTDGI VLIDDTINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKLLMNRVGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTPSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLEGKDCQGEG RQTEKCTKSPCPINGNWGPWSLWDTCSATCGGGAQTRKRLCNDPAPKYGGKECQGDPKAT QLCNKNTCPIDGCLSNPCFPGTKCTSFPDGTWRCGKCPSAYSGDGIKCNDIDECKEVPGA CFVFNGVHRCENTDPGYNCLPCPSRYSGPQPFGRGVEEATAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIADDRDNCPFVYNPRQYDYDRDDIGDRCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWNNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTPGQVKTLWHDPKKIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctgttgatgcttttgacctgcgagagcgtacgagtt gcagagaaccgagacgacaatagcgtgtacgacctgttcgagctggtccaagtctccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgagctccccgagagctccttcagggacctcatcgattcc atccatgccgagaggggcttcctcctcctgcttaacttcaagcagtttaagcggaccagg ggctccctcttgaccgtggagaagcgggacgggtccggagccgtgttcgagatagtctcg aatggaaaagcgaacaccctggatgtggttttctccaccgttaataagcaacaggtggtc tcgatagaagatgtggacttggcgacgggccactggaagaatattacgctgttcgtgcag gaggaccgggcgcagctgtatgttggctgtgaggaggtgaacacggcggaactggacgct cccatccagagcatcctcactcaggaaactcccgccacagcgcgcctcaggattgggaag ggagcggtgaaggaccggttcatgggggtgctccaaaacgtgcgctttgtctttggaaca actttggacgcgattctgcgcaacaagggatgccaaaactctgttctgactgatgggatc gtccttatcgacgacaccatcaatgggtccagccctgccattaggacggactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgcgaggacctggctggcatg ttcaaggaactgaagggtctgggagtggtggtgaaggagctgtccaatgagctgcgcaaa gtgacggatgagaacaagttgttgatgaacagagtggggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgtaccgagtgc acttgtcaaaactctgccaccgtgtgccgtaagatatcctgccccctgatcccttgtgcc aacgccaccgtgcccgatggagagtgctgcccacgctgtggaacaccgagtgactatgcg gaggatggatggtccctgtggtctgaatggacccactgttccgtgtcttgtgggcgggga attcagcagagaggccgctcctgcgaccgcatcaacaacaactgcgagggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgcctctgcaactcccccacaccccagctagaaggcaaggactgccaaggagaggga agacagactgagaagtgcaccaagtcaccctgcccaatcaacggtaactggggaccctgg tcgctatgggatacctgctctgccacctgtgggggaggagctcagacacgtaaacgtctc tgcaacgaccccgcccctaaatatggtggtaaggagtgccagggtgaccccaaggccact cagctgtgcaacaagaacacctgtcccatcgatggctgtctgtccaacccttgcttccct gggaccaagtgcaccagcttccctgatggaacatggaggtgtggaaaatgcccctctgct tactctggtgacggcatcaagtgcaatgacattgatgagtgcaaagaggttcctggcgct tgcttcgtattcaatggagtacaccgctgtgagaacactgaccctggctataactgcctg ccctgtccctcacgatactctggacctcagcccttcggcaggggagtggaggaagccacc gccaagaaacaggtgtgtacaccacgtaacccctgcctggatgggagccacgactgcaac aagaacgcccgctgtaactacctgggacactttgccgaccccatgtaccgctgtgagtgt aagcctggctatgctggaaacggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggatggtgttggtgacgcttgt gacaacgatgatgataatgatggtattgctgatgacagggataactgtccgttcgtgtac aaccccaggcaatatgactatgacagagatgatattggagatcgttgtgataactgtccc tacaacagcaaccctgaccagaccgacacagacaacaacggggaaggagacgcctgctct gtggacattgatggagatggcattctgaatgagaaagacaactgtccgtacgtctacaac gtggaccagagagacactgacctggatggtgtgggagacatgtgtgacaactgtccgctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagataagtgtgacagc aaccaggacatcgatgaagacggccaccagaacaacctggacaactgcccctacatcccc aacgctaaccaggccgaccacgacaaagacggaaaaggagatgcctgcgaccacgatgat gacaatgacgggatcccagatgagaaagataactgcagactggccttcaaccctgaccag atcgactccgatggtgatggtcgaggagatgcttgcaaagacgactttgaccaagacaat gtgcctgacatctacgacgtgtgtccggagaactttgacatcagcgagacggacttcagg aagttccagatggttcctctggaccccaagggaacgtcccagatcgaccccaactgggtg gtcagacatcagggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactctgtggacttcagtggtaccttcttcatcaacacagagaga gatgatgactacgccggctttgtgttcggctaccagtctagctccaggttctacgtggtg atgtggaagcagatcacacagacctactggaacaacaaacccaccaaagctcagggatac tcaggactgtccatcaaagtggtcaactccactactggacctggtgagcacctcaggaat gctctctggcacactggtaacaccccaggacaggtgaagactctttggcacgaccctaag aaaattggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatggctgattctgggagcata tatgacaagacgtacgcaggcggaagactaggcctctttgtcttctcacaagagatggta tacttctcagacctcaagtatgaatgcagagatgcataa

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