Salmo salar (Atlantic salmon): 106609566
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Entry
106609566 CDS
T04363
Name
(RefSeq) apoptotic protease-activating factor 1-like
KO
K02084
apoptotic protease-activating factor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04115
p53 signaling pathway
sasa04210
Apoptosis
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106609566
04115 p53 signaling pathway
106609566
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106609566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
APAF1_C
NB-ARC
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_EIPR1
PEP5_VPS11_N
eIF2A
WD40_like
Ge1_WD40
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_2nd
CARD_2
Beta-prop_IP5PC_F
Beta-prop_WDR11_2nd
NACHT
AAA_16
nSTAND1
AAA_22
DUF3944
Motif
Other DBs
NCBI-GeneID:
106609566
NCBI-ProteinID:
XP_014063984
UniProt:
A0A1S3SI21
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All DBs
Position
ssa07:complement(47086922..47157382)
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AA seq
1265 aa
AA seq
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MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKPTRREQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDGGTRYVQAVLSEG
GVPQRPVVFVSRPALVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRDHALITEC
FPGGVHWLSIGQLDRADLLVRIQSLCFRLEQQSQEKDPSSSLHRPPGSLEEAKERLRFLM
LRRYPRSLLILDDIWDSSVLRAFDIQCRVMLTTRDRSLADCVSGFKSEVAVESGLEEDQA
LEILALYVNRKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFK
RIRKSSSYDYDALDQAMAASIQVLSEEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEV
EDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSDLESLHTKVVRQYQQRYSQG
PPTSGDEECLYWFRFLTYHMAKANLTQELYSLMFSLDWVRTKAQIMGPAHLINDYVEYGA
ILDKENSEVRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRG
GLYLDWMNKSSLKSLSRLVVQPHQGSIYAACFSHDGTKIASCGSSKTLRVFKSTSGEKLL
EIQAHDDEVLCCAFSPDDRLLATCSSDRKVKVWNVERGTLMRMFEEEHEEQVNHCQFTNT
RRRLLLATCSNDKFMNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDTYLSTSSSDGTLK
LWEVSSANEWKSIDVADMFPEQREQTAVMVKCSTWSADGRTIICAARNAVFVFDVETAAM
LLEIRTSRLSTVQYCHSCPSSNLVAIALSHYAVELWDIETSKKMADCSGHLSWVHGVQFS
PDGSLLLSCSDDQTVRVWETNRVHTSSAVCLKRDSDVLFNNGDITVVAADNRNRLQVRNG
RTGAVVFQSEDQTSRIRCTAICSQTSAVGLGREDGTIQVLEVPSGTSLATLQGHTRTVLH
CQFTPEGHTLITSSEDTTIRVWRWRTGECVVLEGHKEQVRCFSLLTTSPSETHLLSWSFD
GTIKVWDMSSGERLQDLVCHQGAVLACDVSPDGQLFATTSADKTAKVWTSASWECVRLLN
GHQDCVRSCKFSWDGRRLATGDDNGEIRLWNMKDGTLLKICSSDNKDAMDSLHGGWVTDL
HFSPDNTVLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILYI
LKKVE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggaggaaggggcgcggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgacggcgtgctgacaggg
gatgaggaggacaggatcaggagcaagcccaccaggagagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaacgccctggtccgc
gagagctatggagacctggccagcctgctccacaacagcctgcccctggtctcccctgag
gctgagaagagcttctcagacgggggcacccgctatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacccgtggtgtttgtgagccggccagccctggtgaaccgggtcagg
gagaagctctaccgcttgcagaaggagcccggctgggtcactgtgttcggcatggccggc
tccggcaagtctgtcctggctgcggaggcagtccgagaccacgcactcatcacagagtgt
tttccaggaggagtccactggctgtccataggccagctggaccgggctgacctactggtt
aggatccagtcactgtgtttccgcctggagcagcagagccaggagaaagacccctcgtcc
tccctccaccggcctcctggctctctggaggaagccaaggagcgactacgcttcctcatg
ctccgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctcggtgctc
agggcctttgacatccagtgtcgagttatgctcaccacccgagacagaagcctagccgac
tgtgtcagtggttttaagtctgaggtggcagtggagagtggtctggaggaagatcaggcc
ttggagatcctcgccctgtatgtcaacaggaaaccccagagactcccagaacaggcccgc
agcattgtccgagagtgcaaaggctcccccttggtggtgtccctaatcggggccctgctg
cgggagttcccggaccgctgggcctactacctgcacacgctccagcagaagaagttcaag
cgtattcgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagc
atccaggtcctgtctgaggaacacagggagctgtacattgacctcaccgtgctggagaag
gacgtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggta
gaggacgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccgg
ccctacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctct
gatctagagagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggt
ccccccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatg
gccaaggccaacctcacacaggagttgtactctctgatgttctctctggactgggtcaga
actaaagctcagattatgggaccggctcatctcatcaatgactatgtggagtacggcgcc
atactggacaaagagaacagcgaggtgcggggccacttccaggagttcctgtctctgaac
ggccaccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagcca
gactcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggg
ggactctaccttgactggatgaacaaaagtagtctgaagagcctgtctcgtctggtggtc
cagccccaccagggatccatctacgctgcctgcttctcccacgacggcaccaagatcgcc
tcctgtggctccagcaagacactgcgagtgtttaagagcacctctggggagaagctgctg
gagatccaggcccacgacgatgaggtgctctgctgcgccttctcccctgatgaccgtctc
ctagcaacctgctccagtgataggaaggtcaaggtttggaacgtggagcgtgggactctg
atgaggatgtttgaggaggaacacgaggagcaggtcaaccactgtcagttcaccaacaca
cgccgacgcctcctactggccacctgttccaacgacaagttcatgaacaccaagctgtgg
aacatcaataaaccctcctcccagaacaccatgtttggtcatttggagcctgtcaatcac
tgctgtttctcccctgatgacacctacctctccacctcttccagcgacggaaccctgaag
ctgtgggaggtgtcctcggccaatgagtggaagtccatagacgtggcggacatgttcccg
gagcagagagagcagactgcggtcatggtgaagtgcagcacctggtcagcagacggcagg
accatcatctgtgctgccaggaacgcggtctttgtgtttgatgtagagacggcggccatg
ttgttggagatccggaccagtcgcctgagcacggtgcagtactgtcactcctgtcccagc
agcaacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagacc
agtaagaagatggctgactgtagtggtcatctgagctgggtccatggagtccagttctcc
cctgacggatctctactgctctcctgttctgacgaccagaccgtcagggtgtgggagacc
aatagagtccacacctcctcggctgtctgtctgaagagggactctgacgtgctctttaac
aacggtgacattaccgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatggg
aggaccggagcggtggtgttccagtcagaagaccagacgtctcgtatccgctgcactgct
atctgctcacagacctcagccgtggggctgggacgagaggatgggacgatacaggtgttg
gaggtgccatcggggacctctctagccactcttcagggtcacaccaggacagttctccac
tgccagttcaccccggagggacacacactcatcacctcctctgaggacaccaccatacgg
gtgtggaggtggaggacaggtgagtgtgtggttctggagggccacaaggagcaggtcaga
tgcttctctctgctcaccacctcaccctcagagacacatctcctcagctggtccttcgac
ggcaccatcaaggtgtgggacatgtctagtggtgaacggctgcaggacctagtgtgtcac
cagggggcggtgctagcctgtgacgtgtcgcctgacggacagctctttgccaccacctcc
gctgacaagactgctaaggtgtggaccagtgcatcgtgggagtgcgtgcgcctgttgaat
ggccaccaggactgtgtccgcagctgcaaattctcttgggacggccgtcgcctagcaacc
ggcgacgacaacggagagatacggctgtggaacatgaaggatggtactctgctaaagatc
tgttccagtgacaacaaagacgccatggactctctgcacggaggctgggtgaccgacctg
cacttctccccagacaacactgtgctgctgtctacaggaggatacattaagtggtggaac
gtggagaaaggggaggccctccagaccttctacccgacaggagccaatctgaaaaggatc
catgtgtcacctgacttctccaccttcgtcaccatagacaatatcggaatcctctacatc
ctgaagaaggtggaatga
DBGET
integrated database retrieval system