KEGG   Salmo salar (Atlantic salmon): 106609566
Entry
106609566         CDS       T04363                                 
Name
(RefSeq) apoptotic protease-activating factor 1-like
  KO
K02084  apoptotic protease-activating factor
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04115  p53 signaling pathway
sasa04210  Apoptosis
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    106609566
   04115 p53 signaling pathway
    106609566
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106609566
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 APAF1_C NB-ARC Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 APAF-1-like_WHD Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th CARD Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st RMC1_N Beta-prop_EIPR1 PEP5_VPS11_N eIF2A WD40_like Ge1_WD40 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR75_2nd CARD_2 Beta-prop_IP5PC_F Beta-prop_WDR11_2nd NACHT AAA_16 nSTAND1 AAA_22 DUF3944
Other DBs
NCBI-GeneID: 106609566
NCBI-ProteinID: XP_014063984
UniProt: A0A1S3SI21
LinkDB
Position
ssa07:complement(47086922..47157382)
AA seq 1265 aa
MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKPTRREQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDGGTRYVQAVLSEG
GVPQRPVVFVSRPALVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRDHALITEC
FPGGVHWLSIGQLDRADLLVRIQSLCFRLEQQSQEKDPSSSLHRPPGSLEEAKERLRFLM
LRRYPRSLLILDDIWDSSVLRAFDIQCRVMLTTRDRSLADCVSGFKSEVAVESGLEEDQA
LEILALYVNRKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFK
RIRKSSSYDYDALDQAMAASIQVLSEEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEV
EDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSDLESLHTKVVRQYQQRYSQG
PPTSGDEECLYWFRFLTYHMAKANLTQELYSLMFSLDWVRTKAQIMGPAHLINDYVEYGA
ILDKENSEVRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRG
GLYLDWMNKSSLKSLSRLVVQPHQGSIYAACFSHDGTKIASCGSSKTLRVFKSTSGEKLL
EIQAHDDEVLCCAFSPDDRLLATCSSDRKVKVWNVERGTLMRMFEEEHEEQVNHCQFTNT
RRRLLLATCSNDKFMNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDTYLSTSSSDGTLK
LWEVSSANEWKSIDVADMFPEQREQTAVMVKCSTWSADGRTIICAARNAVFVFDVETAAM
LLEIRTSRLSTVQYCHSCPSSNLVAIALSHYAVELWDIETSKKMADCSGHLSWVHGVQFS
PDGSLLLSCSDDQTVRVWETNRVHTSSAVCLKRDSDVLFNNGDITVVAADNRNRLQVRNG
RTGAVVFQSEDQTSRIRCTAICSQTSAVGLGREDGTIQVLEVPSGTSLATLQGHTRTVLH
CQFTPEGHTLITSSEDTTIRVWRWRTGECVVLEGHKEQVRCFSLLTTSPSETHLLSWSFD
GTIKVWDMSSGERLQDLVCHQGAVLACDVSPDGQLFATTSADKTAKVWTSASWECVRLLN
GHQDCVRSCKFSWDGRRLATGDDNGEIRLWNMKDGTLLKICSSDNKDAMDSLHGGWVTDL
HFSPDNTVLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILYI
LKKVE
NT seq 3798 nt   +upstreamnt  +downstreamnt
atggcgatgatggaggaaggggcgcggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgacggcgtgctgacaggg
gatgaggaggacaggatcaggagcaagcccaccaggagagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaacgccctggtccgc
gagagctatggagacctggccagcctgctccacaacagcctgcccctggtctcccctgag
gctgagaagagcttctcagacgggggcacccgctatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacccgtggtgtttgtgagccggccagccctggtgaaccgggtcagg
gagaagctctaccgcttgcagaaggagcccggctgggtcactgtgttcggcatggccggc
tccggcaagtctgtcctggctgcggaggcagtccgagaccacgcactcatcacagagtgt
tttccaggaggagtccactggctgtccataggccagctggaccgggctgacctactggtt
aggatccagtcactgtgtttccgcctggagcagcagagccaggagaaagacccctcgtcc
tccctccaccggcctcctggctctctggaggaagccaaggagcgactacgcttcctcatg
ctccgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctcggtgctc
agggcctttgacatccagtgtcgagttatgctcaccacccgagacagaagcctagccgac
tgtgtcagtggttttaagtctgaggtggcagtggagagtggtctggaggaagatcaggcc
ttggagatcctcgccctgtatgtcaacaggaaaccccagagactcccagaacaggcccgc
agcattgtccgagagtgcaaaggctcccccttggtggtgtccctaatcggggccctgctg
cgggagttcccggaccgctgggcctactacctgcacacgctccagcagaagaagttcaag
cgtattcgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagc
atccaggtcctgtctgaggaacacagggagctgtacattgacctcaccgtgctggagaag
gacgtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggta
gaggacgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccgg
ccctacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctct
gatctagagagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggt
ccccccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatg
gccaaggccaacctcacacaggagttgtactctctgatgttctctctggactgggtcaga
actaaagctcagattatgggaccggctcatctcatcaatgactatgtggagtacggcgcc
atactggacaaagagaacagcgaggtgcggggccacttccaggagttcctgtctctgaac
ggccaccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagcca
gactcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggg
ggactctaccttgactggatgaacaaaagtagtctgaagagcctgtctcgtctggtggtc
cagccccaccagggatccatctacgctgcctgcttctcccacgacggcaccaagatcgcc
tcctgtggctccagcaagacactgcgagtgtttaagagcacctctggggagaagctgctg
gagatccaggcccacgacgatgaggtgctctgctgcgccttctcccctgatgaccgtctc
ctagcaacctgctccagtgataggaaggtcaaggtttggaacgtggagcgtgggactctg
atgaggatgtttgaggaggaacacgaggagcaggtcaaccactgtcagttcaccaacaca
cgccgacgcctcctactggccacctgttccaacgacaagttcatgaacaccaagctgtgg
aacatcaataaaccctcctcccagaacaccatgtttggtcatttggagcctgtcaatcac
tgctgtttctcccctgatgacacctacctctccacctcttccagcgacggaaccctgaag
ctgtgggaggtgtcctcggccaatgagtggaagtccatagacgtggcggacatgttcccg
gagcagagagagcagactgcggtcatggtgaagtgcagcacctggtcagcagacggcagg
accatcatctgtgctgccaggaacgcggtctttgtgtttgatgtagagacggcggccatg
ttgttggagatccggaccagtcgcctgagcacggtgcagtactgtcactcctgtcccagc
agcaacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagacc
agtaagaagatggctgactgtagtggtcatctgagctgggtccatggagtccagttctcc
cctgacggatctctactgctctcctgttctgacgaccagaccgtcagggtgtgggagacc
aatagagtccacacctcctcggctgtctgtctgaagagggactctgacgtgctctttaac
aacggtgacattaccgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatggg
aggaccggagcggtggtgttccagtcagaagaccagacgtctcgtatccgctgcactgct
atctgctcacagacctcagccgtggggctgggacgagaggatgggacgatacaggtgttg
gaggtgccatcggggacctctctagccactcttcagggtcacaccaggacagttctccac
tgccagttcaccccggagggacacacactcatcacctcctctgaggacaccaccatacgg
gtgtggaggtggaggacaggtgagtgtgtggttctggagggccacaaggagcaggtcaga
tgcttctctctgctcaccacctcaccctcagagacacatctcctcagctggtccttcgac
ggcaccatcaaggtgtgggacatgtctagtggtgaacggctgcaggacctagtgtgtcac
cagggggcggtgctagcctgtgacgtgtcgcctgacggacagctctttgccaccacctcc
gctgacaagactgctaaggtgtggaccagtgcatcgtgggagtgcgtgcgcctgttgaat
ggccaccaggactgtgtccgcagctgcaaattctcttgggacggccgtcgcctagcaacc
ggcgacgacaacggagagatacggctgtggaacatgaaggatggtactctgctaaagatc
tgttccagtgacaacaaagacgccatggactctctgcacggaggctgggtgaccgacctg
cacttctccccagacaacactgtgctgctgtctacaggaggatacattaagtggtggaac
gtggagaaaggggaggccctccagaccttctacccgacaggagccaatctgaaaaggatc
catgtgtcacctgacttctccaccttcgtcaccatagacaatatcggaatcctctacatc
ctgaagaaggtggaatga

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