Salmo salar (Atlantic salmon): 106610281
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Entry
106610281 CDS
T04363
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00514
Other types of O-glycan biosynthesis
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106610281
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106610281
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106610281
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
106610281
Glycosyltransferases [BR:
sasa01003
]
Glycan extension
O-Glycan
106610281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
106610281
NCBI-ProteinID:
XP_014065025
UniProt:
A0A1S3SL01
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Position
ssa01:complement(77400313..77440406)
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AA seq
408 aa
AA seq
DB search
MHVSSMGVSKLCFLFSLALCALLLLIPTLQPSQHQGDLPQPRAHNKPARHPGRLVVPLQA
DMGKVTVGRNGIDGDSMGQSTPRETKRTVDGDWVYTARRADTQGTGKHTDSQTGSEGDFL
HRAGGVTGAGGSQPRNPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKAKEQTFIFTDGE
DQELRRRAGANVINTNCSAAHTRQALCCKMSVEYDKFIESQRKWFCHMDDDNYVIVPSLL
KLLSSYHHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSP
WASLGNFISTAEKIRLPDDCTMGYIIEALLEVTLTHTHLFHSHLENLQRLPTDTVLEQVT
LSYGGFENRRNVISIGGAFSLVEDPSRFKTVHCLLYPETDWCPSKGHH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcctcgatgggtgtcagcaagctctgcttcctgttctccctggctctctgt
gctttgttgctcctcatccccaccctccagccctcacagcatcagggggacttgccccag
cccagggcccacaacaagcctgcccggcaccctggacgtctggtggttcctctccaggca
gatatggggaaagtgacagtggggcgtaatgggattgatggtgactctatggggcagagc
acaccaagagagaccaagaggactgtggatggggactgggtgtatacagctcgtcgagct
gacacccagggcactgggaagcatacagactctcagacagggtcagagggggacttcctc
cacagagctgggggtgtgacgggggctggagggtctcagcccaggaaccctctggagctg
aaagacattttcatagcggtgaagaccaccaggaagtaccacaagtccagattggatctg
ctgttccagacctgggtgtccaaagccaaagaacagacctttatattcacagatggggag
gatcaggagctgaggaggagagcaggggctaacgtcatcaacactaactgttcagcagca
cacacacggcaggcgctgtgctgtaagatgtctgtggaatacgacaagttcatcgagtca
cagaggaagtggttctgccatatggatgatgataactatgtgattgtacccagtctgctg
aagctgctgtcctcctaccatcacacgcaggatgtttacctgggcaggcccagcctcgac
caccccatagaggccgcagagagggtcaagagtgacggatctgtgtcagtgaagttctgg
tttgctacaggaggagcagggttctgtatcagtcgtggtctggccctcaagatgagtcca
tgggctagtctggggaacttcatcagcacggcggagaagatccgtctccctgacgactgc
accatgggttacatcatcgaggcgctgctggaggtgacactgacacacacacacctcttc
cactcccacctggagaacctgcagaggcttcccacggacaccgtgctggagcaggtcaca
ttgagctacgggggttttgagaacaggaggaatgtgatcagcattggaggagccttctct
ctggtggaggacccgtcacgatttaagactgtccactgcctcctctacccagagactgac
tggtgtcctagtaaggggcaccattga
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