Salmo salar (Atlantic salmon): 106612162
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Entry
106612162 CDS
T04363
Symbol
BIRC4
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04210
Apoptosis
sasa04217
Necroptosis
sasa04510
Focal adhesion
sasa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106612162 (BIRC4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106612162 (BIRC4)
04217 Necroptosis
106612162 (BIRC4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106612162 (BIRC4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106612162 (BIRC4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106612162 (BIRC4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106612162 (BIRC4)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106612162 (BIRC4)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106612162 (BIRC4)
Peptidases and inhibitors [BR:
sasa01002
]
Peptidase inhibitors
Family I32: IAP family
106612162 (BIRC4)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106612162 (BIRC4)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106612162 (BIRC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
106612162
NCBI-ProteinID:
XP_014068572
UniProt:
C0HAV7
LinkDB
All DBs
Position
ssa09:80712204..80722774
Genome browser
AA seq
467 aa
AA seq
DB search
MSGPGRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDTPAERHAEVSPNCKFLSCTHRSRVNSLQGAMLTNEPHYNEDAEDMEFR
LRTGEVVDETTYPMVPHMVSEDSRFNTLDPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGMLGGWEPGDTAWGEHSKHFPYCFFILGHDVGNLPSQAGREGEVEETRPRPGPWVPMQ
SFEERLGSFAGIQHPIDHERLARAGFYNTGAPDRVVCFCCGGGLKGWQPDENPWEEHAKH
YPGCRFLLAEKGQEFVSSVQLQGPGWNNAASSHLNGCSSHGTEVLRSAMAQRAVEMGLEP
ALVERTILERIRRAGTGYSTLETLLQDCFNRGPDSDAETAENHDEDPLEKLRKLQREKQC
KVCMDRDICIVFIPCGHLVVCKECSEALGKCPICCAAITQKIKTYIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccctgggagagacagtgatctggagtcagaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggaa
aggctggcccgcgctgggttttacttcacaggacaggctgacaaggtgcgctgcttcagc
tgccacaaaactgttgagaactggtgtggaggggacacacccgcagagaggcacgcggag
gtctcccccaactgtaagttcctgagctgcacccatcgttccagggtcaactctcttcaa
ggtgccatgctgaccaacgaaccccactacaacgaagacgccgaggacatggagttccgc
ctgagaacgggagaggtggtggatgagaccacctaccccatggtcccgcacatggtcagc
gaagactcccggttcaacaccttagacccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagcgaccgggtgcagtgcttctgc
tgtggagggatgctggggggctgggagcctggggacacggcatggggggagcactccaag
cacttcccctactgcttcttcatattggggcatgatgtggggaacctcccctctcaggcg
gggagagagggggaggtggaggagaccaggccacgcccgggtccttgggtccccatgcag
agctttgaggagaggctaggcagctttgcaggaatccagcaccctattgaccacgagagg
ctggccagagcaggcttctacaacacaggagctccagaccgtgtggtgtgtttctgctgt
ggtggaggtctgaagggctggcagccggacgagaatccctgggaggagcacgccaaacac
tatccggggtgtcgttttctgctggcagagaaaggacaggagttcgtcagtagcgttcag
ttacaaggtcctggctggaacaatgctgcttcaagtcacctgaatggatgttcaagtcac
ggaacagaggtgctgaggtcagctatggcccagagggcggtagaaatgggtctggagcct
gccctggtagagaggactatactggagaggatacgcagggctgggacaggctactccact
ctggagactctgctgcaggactgctttaacagaggccctgacagcgacgcagagaccgca
gagaaccatgatgaggatcccttagagaaactacggaagctgcagagggagaaacagtgc
aaagtgtgtatggacagagacatctgcattgtcttcatcccctgtgggcacctggtcgtc
tgcaaggagtgttccgaggcgctcggcaagtgtcccatctgctgtgcagccatcacacag
aagatcaagacatacatctcctaa
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