Sylvia atricapilla (blackcap): 136357607
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Entry
136357607 CDS
T10263
Symbol
RNF17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
sati Sylvia atricapilla (blackcap)
Brite
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Gene silencing
piRNA pathway
136357607 (RNF17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
SKA2
BLYB
Motif
Other DBs
NCBI-GeneID:
136357607
NCBI-ProteinID:
XP_066169128
LinkDB
All DBs
Position
2:42520826..42561030
Genome browser
AA seq
1475 aa
AA seq
DB search
MSGKEEFSSLDGKEFPGSRMEDVGQSSKLLEENFTEPHQRNDDLCHVSKALRAEVLHGDE
KDEDTDLFCFPSPEKGMDFKLELCGSNSERQARPFSHNTREKNVQYPFSTCDGLSDGSAL
TPSSDMENHTGQDIDEALGIAVSNLGHFHDASKVLEYLELKVKHKKDEVTEAADRTFDEL
ITLLSRKRKLFAELENINNYSSSIAKAKEIIEEKKQHLIGAVRTAKELKFSRSLRNCCDL
TQIICDLKLPVEAELSRVKNLKEKILSSEDNIQDTLMLDDQEEMPDVIIEEILEDDMEGL
TELVFVSHVINPCHFYIRRYSQKKEAFALQKKLENFCSSSSSYLLPSDILEIGARTFIKS
KDTGMWCRGTITELIPVESKNRRKMPCGPIRYEVRDVGLLEIFLIDYGSSVVLIFSGYDP
TEKPDPSTLQTIETHDICLFVRKPDQHIEAELAAIPPLAVRCALKDVVPKNEDEGWGEEA
KTKFLEMVNNKVVSMMVFREEDGVLIVDLGKPPFNEISSNLPLSLKDALVFLDLARFKLQ
LPSQLENFSISQYSPPNIPQEGEEVFVVICHINSPSDFYLCLRESAESLALLEEIQEIYK
QENAKNLEIISPVKGQACIAKQEDGNWYRAQIIGLPSCQEVLVKYVDYGNIANLTNKDIR
RVKQEFLSFPEKAIRCRLACIEPFKGANEWNREAKERFEEMTEDKLMLCSVIEILDNNIL
SIELFNASADNGRKFSVNCQLVEEDLASYMPGYTERTEVRPNEIWDDPLEEISKTSESFI
PIDMELVDEGDYRSICNKELHGRISHVVSPSKIFVQLLSSESILKSLQEEMASFYKESQP
ESVKWESGMHCAVYIHDVGQWQRGQISRIVSETSAEVLLYDSGAEKAVEVSCLRKLEENM
KTIRTLAIECSLTEIRPTGGSTQWTATVCECLSYYLTGAQVKIVIQENDTSCALPVKILC
KDETGKMIDTSEYLIEQGLALRNRRTGKADEACLVSKEHLEVPFEQGNTQLDVSNSKIAC
ARNRTVPEEKNTISESEQKSLKTYKPHSGVDEVYKSPIVPEEKIFQAVVSCIGNDGTIYI
IPKSFETALNKLMAEIQNTFKGLGLLIPYCWKKGEACVVRGSDTVWYRAKIIEVSSSILQ
VQYIDRGYIESIPQCHLYPTTFYTDIPPFCIPCQLYKTLPIGNFWQQDAVDYLQELLKNE
EVEIHVEELPDNPWGKMSIRLYFGGMSLSSFMAYQKYCVAEGGQDVQKLGVFEGGLSPSY
LLQPLPVPGEVFPVTVTHVVSPKEIYICFDSSGSLTKHSATERAASCDSESLNKALKWCN
KIVKTLPHLTNFEKELPCLAEYVDGLWYRAKVLSITQLVPVQILVQFVDYGTYLVAPSSR
LRHIPCPLLKYPVQAVRVLLAGFRPASDDRNVERIPYSPEWSLKALWAMLDCVEGKNLSA
SILTLSPEVTISLYGDDKNLVHLKLIEMGLAELDE
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaggaagagttctcctccttggatggtaaagagtttcctggaagcaggatg
gaagatgtggggcagtcttctaagctcctagaagagaactttacagaaccacatcagaga
aatgatgacttgtgtcatgtgtcaaaagctctccgtgcagaagtgttgcatggtgacgag
aaggatgaagacactgatttgttttgcttcccttctccagaaaaaggaatggactttaaa
cttgagctgtgtggcagcaactcagaaagacaagcaaggcccttcagtcacaataccaga
gagaaaaatgttcagtacccattttctacctgtgatgggctgagtgatggatcagctcta
actccatcatctgacatggagaaccacactgggcaagatattgatgaagctttgggcata
gctgttagtaatcttggccacttccatgatgcaagcaaggtgctggaatacttggagttg
aaagtaaagcataaaaaagatgaagttacagaagctgcagatagaacatttgatgaactt
attactcttctgtcaaggaagaggaaattgtttgcagaattagagaacatcaacaactac
agttctagtattgcaaaagccaaggaaatcattgaagagaagaagcagcacttgattggt
gccgttaggacagcaaaggaactaaaattttcacgttctctaagaaactgttgtgatctc
actcagattatttgtgacttgaagttgccagtggaagctgagctctcaagagtgaagaat
ttaaaggaaaaaatactttcaagtgaagataatatacaagacactcttatgcttgatgac
caggaagaaatgcctgatgtcataatagaggaaatacttgaagatgacatggaaggtttg
acagagttggtgtttgtaagccatgttataaatccatgtcatttctatattcggagatat
tcacagaagaaagaagcatttgctttgcagaagaaattggaaaacttctgctctagtagc
agttcctatctcttgccttcagacattttggaaataggtgctagaactttcattaagagt
aaggacactggaatgtggtgccgtggaactatcactgagctgattcctgtagaaagtaaa
aatcggaggaaaatgccttgtggtccaataagatatgaagtgcgtgatgttgggttgctg
gaaatattcctgattgattatggaagctctgtggttctgattttctcagggtatgatccc
actgaaaagcctgatccttctactctgcaaactattgaaacccatgacatttgtctgttt
gtgaggaagcctgaccagcacattgaggcagagcttgcagccattcctcctttagcggta
cggtgtgcactgaaggatgttgttcccaaaaatgaagatgaaggttggggagaggaggca
aagacaaaatttttagaaatggtaaataataaagttgtttcaatgatggtgtttagagaa
gaggatggtgttctcattgtggatttgggaaaacctccatttaatgaaataagcagtaac
ctaccactgtctctcaaggatgcgttggttttcttggatttggcaaggtttaaattgcag
cttcccagtcagctggaaaatttcagcatctctcagtacagtccaccaaatattccacag
gaaggagaagaggtctttgttgtgatttgtcacattaatagtccaagtgatttctatctc
tgcttgagagagagtgcagaatctttagctcttctggaggaaattcaggagatctataaa
caagagaatgctaaaaacttggaaattatctccccagtcaaaggccaagcctgcattgca
aaacaggaggatgggaattggtacagagcacagattatagggctgccaagttgtcaggaa
gttctggtaaagtatgttgactatggcaacattgctaacttaactaacaaagacatacgc
agagtgaaacaggagtttctgagctttcctgaaaaggcaatcaggtgtaggctggcttgc
attgaaccattcaaaggggcaaatgagtggaacagagaagccaaggaaagatttgaagaa
atgactgaagataagcttatgttgtgttcagttattgaaattttagataataacatctta
tctattgagctcttcaatgcctctgctgataatgggagaaaatttagtgttaactgccag
ctagttgaggaagacttagcatcctacatgcctgggtacactgaaagaactgaagtaagg
cccaatgaaatatgggatgatcctctagaagaaatttctaaaacctcagaatctttcatt
cctatagacatggaacttgttgatgaaggagattacagatcaatttgtaacaaggagtta
catgggagaattagtcacgttgtgtctcctagtaaaatatttgtacaattgctgtcatca
gaaagtatactgaaaagtttacaggaggagatggcttccttctacaaagaatcccagcca
gagtctgtgaagtgggagagtggaatgcactgtgctgtttacatccatgatgtgggacag
tggcaaagaggtcagatcagcaggattgtctctgaaacaagtgcagaggtactgctttat
gattctggagctgaaaaagcagtggaggtcagctgtctaagaaaacttgaggaaaacatg
aagaccattaggacattagcaatagaatgttcactgacagaaataagacccacaggtgga
agcacacagtggacagcaacagtgtgtgaatgcttatcctattacctaactggagcacaa
gtgaaaatagtcatacaggaaaatgatacgagttgtgcattgcctgtgaaaattctttgc
aaagatgaaacgggaaaaatgattgatacttctgaataccttattgaacagggtttggct
cttagaaacagaaggactggtaaagctgatgaggcttgtttagtctccaaggaacatctt
gaagtaccttttgagcaggggaacacacagctggatgtttctaattccaaaattgcctgt
gcaagaaacaggactgttccagaggaaaaaaacactatttcagagagtgagcaaaaatca
ctcaaaacatacaagcctcattcaggagtggatgaagtatataaatctcccattgttcct
gaagaaaaaattttccaggctgttgtgagttgtattggaaatgatggaactatttatata
ataccaaaatcatttgaaactgcactaaacaaattgatggctgaaatacaaaataccttc
aaaggtcttggtctcctgataccctactgctggaaaaagggagaggcctgtgttgtaaga
ggatcagatactgtgtggtatcgagctaaaataatagaagtcagcagtagtattcttcag
gtacagtacatagatcgtggttacatagagagcatccctcagtgtcacctgtatccaact
acattttacactgacattcctccattttgcatcccatgtcagctctacaagacactgccg
attggaaacttttggcagcaagatgcagtagattaccttcaagaacttctgaaaaatgaa
gaggttgaaattcatgttgaggaattaccagataacccatggggcaagatgtccatcagg
ctgtattttggggggatgtcgctttcgtccttcatggcataccagaagtactgtgttgct
gaaggtggccaggatgtacagaagctgggggtatttgaaggaggcctttcaccttcatac
ctgctgcagccactgcctgttccaggagaagtgtttcctgtcacagttacccacgtggtg
tcccctaaggagatttatatttgttttgattcttctgggagccttacaaagcactctgcc
acagagagagctgccagctgtgactcagagagccttaataaagccctgaagtggtgcaat
aaaattgtaaagacccttcctcatctaacaaacttcgaaaaagaattgccttgccttgca
gagtatgtggatggtttatggtatagagcaaaggtcctctctattacacagctcgtccct
gttcagattctggttcagtttgttgactatggtacttacttagttgcaccatcaagcagg
ttgcgtcacataccttgtcctctgctgaagtacccagttcaagcggtacgagttctgctg
gctggatttagacctgcttcagatgacagaaatgtggaaagaattccttattccccagaa
tggagcttgaaagcgttgtgggccatgctggactgtgttgaaggaaagaatctctctgct
tccatacttactctttcaccagaggttaccatttctttgtatggagatgacaaaaatctg
gttcatctgaagctgatagaaatgggtcttgcagagttggatgagtga
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