Sylvia atricapilla (blackcap): 136357692
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Entry
136357692 CDS
T10263
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136357692 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136357692 (EXOSC8)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136357692 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
136357692
NCBI-ProteinID:
XP_066169291
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All DBs
Position
2:49436158..49445555
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AA seq
239 aa
AA seq
DB search
MCGSITTADGSALVKLGNTTVICGVKAELAAPAVDSANKGYIVPNVELPSLCAERFRSGP
PGEEAQAASQFIADVIENSQMIVKEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALL
AALKNVQLPLVTINEETGLSEVNLKQKNSLIIRKHPVATSFAIFDDTLLIVDPTAEEEDL
ATGTVTIVTDEEGRLCSVHKPGGSPLTGAKFQDCITRAITRHKEVKKLIDKVIKSLTPK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggttcaattacaactgcagatggttctgccctggtgaagttaggaaataccaca
gtgatttgtggagtaaaagcggaacttgctgcacctgcagtggactctgctaataaggga
tatattgttccaaatgtagagctgccatccctctgtgcagagaggtttcgctcgggacca
cctggtgaagaggctcaagcggcgagccagttcatcgcagatgtgattgaaaattcacag
atgatagtgaaagaagatctgtgtattgccaatggcaagcttgcatgggtgttatactgt
gatatcatatgtctggactacgatggaaaccttctggatgccagtgtctttgctttgttg
gcagcattaaaaaatgtgcagttgccattggttacgataaatgaagaaactggtttatca
gaagttaatttaaaacagaagaattctttgattatcagaaagcatccagttgccacatca
tttgctatattcgatgacacattactcatcgttgatccaactgctgaagaagaagattta
gcaactggaacagtaaccattgtaactgatgaagaaggcagactctgttctgtccataaa
ccaggtggaagtcctcttacaggagccaagtttcaagactgtatcaccagagcaattaca
aggcacaaagaagtaaagaagctgatagacaaagtaataaaaagtttaacaccgaagtga
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