Sylvia atricapilla (blackcap): 136357710
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Entry
136357710 CDS
T10263
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136357710 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136357710 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sati04147
]
136357710 (VPS36)
Membrane trafficking [BR:
sati04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
136357710 (VPS36)
Exosome [BR:
sati04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136357710 (VPS36)
Exosomal proteins of colorectal cancer cells
136357710 (VPS36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
BBL5
Motif
Other DBs
NCBI-GeneID:
136357710
NCBI-ProteinID:
XP_066169324
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Position
2:complement(51230209..51251007)
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AA seq
386 aa
AA seq
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MDRFSWTTGLLELGETLVVQQRGVRLSDGEEKVKFGSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWESMPTGQAMQMNKDSQAGRIRAIGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTE
YHMQLAKQLAGILQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcctggaccactgggctgctggagctgggagagacgctggtggtccag
cagcgcggcgtccgcctcagcgacggggaggagaaggtgaaattcggcagtggagtttta
ctgctgagcacccacagactgatctggagggatcagaagaatcatgagtgctgcattgct
gtgcctctgtctcagattgtatttattgaagagcaagcagctgggatagggaagagtgcc
aaaatagtagttcatcttcaccctgcttcttcaaacaaagagcctggcccattccaaagc
agcaaatactcctacatcaagctttctttcaaggaacatgggcagattgagttctacaga
cggttatcagaagagatcacacaaaggagatgggagagcatgcccactggtcaggccatg
caaatgaacaaggattcacaggcaggaagaataagggccataggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttctgaggcttttgaggac
cttagcaaactaatggaaaaggctaaggaaatggtggaattatccaagtcaatagctaac
aagattaaagaaaaacaaggtgacatcactgaagatgagaccattaggttcaagtcctat
ctactgagtatgggtatagctaacccagttacgagggaaacatacggatctggtacagag
taccacatgcagctggcaaagcaactggctggaatcctgcagacacccttagaggagcga
ggggggatcatgtctctcacggaagtttactgcctggtgaaccgtgcccgggggctagag
ttgctgtcaccggaagacttagtaaatgcttgtaaaatgctggaatcactgaaattgcca
ctaaggcttcggatatttgatagtggtgtgatggtgattgaactccagtctcataatgaa
gaggaaatggttgctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtccgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttaagattctacccaaat
ttatttctgacacaaagctaa
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