Sylvia atricapilla (blackcap): 136357754
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Entry
136357754 CDS
T10263
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136357754 (ZC3H13)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
136357754 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
136357754
NCBI-ProteinID:
XP_066169394
LinkDB
All DBs
Position
2:53593898..53640915
Genome browser
AA seq
1654 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKDKKVST
VSSPLLEQQRSSKSNQSKKKGPRTPSPPPPVQEETSLGKKHKEKHKAKERSEEKAREVKE
RGRDFERHKEKKEKQRDPSESSRRQKRSPSPADHSGSNSSPSREYSPPAARRRQTSRAPA
KSTTHKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPVRRSSSPYPPHSSSPPQRKRSPSRHRSPGRDKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDTRDTRDRREPRDSRDTRDSRD
TRDYGRDAKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDLRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRTGRSRGRGPELSDKGSRGTRGSQVDSHSSSGNYHDSWESRSS
YTDRDRYDSRDQARDSSFERRHGERDRRDNRERDQRASSPARHQGRSDDLDRDERREERR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERDRERDKERD
RERDRDRDHDREREREREREKEREREREREERERERERERDRERERERERGRDRDKERDR
QRDWDDKEKGREDRRDKREDIREERGSRDVHEERKSKKRHRNESSPSPRQSPKRRRDHSP
DSDAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHVTEERQSRWKDEERKSDRKESSRRYE
EPEFKERVSSADKQREQPDASEGSRSRVKENLGNRPSEERDASDRMLDDNKKKSKIQKKA
TKKKKDDDSGVERYANEPAPEESQVFSPKKGQKRKNVEKKRKRSKGDSEVSDEEIVPHHK
KKKGPRTPPVNKEELVEAPPEKAVAEVPTKREDTTFSDWSDEDVPERGDIVVPERTTEDS
HRKSHRTRGEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGD
DQTGRKRILHSSSRDRDRDRDRDREREKKSLEITERKSRIDQLKRGEPSRSTSSDRQDSR
SHSSRRSSPESDRQVHSRSGSFDSRERLQERDRHEHDRERERDRREGRQRDWDRDVDKDW
PRSRERERLREREREREKRRELERERDRQLPDTAERERERTLDISSQKESTKHSETKLDR
DHDKEFDGICRDSAASEKEKTDKDLGSLQGFEDGNEAEKVESVEGGEDETKTNDVQSLGS
GAGEYEPISDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREP
GAALLKFTPGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHELGALNMAA
LRRKEERAGLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSL
RLFKRKTVCQVPGQEKTEDSKIPQPALQQEVCVT
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatgttgaagcagagcca
cagaaacgaagtacagaggaatcatcctcccctgttaggaaagagtcttcacgaggaaga
catagagaaaaggaggatatcaaaattacaaaggagcgaacaccagaaagcgaagaggaa
aatggggattgggaaacaaatagagaagactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaaattg
gaacaggaaaacatggagaaacgagaggaaatagtaattaaaaaagagatttctccagag
gtggttagatcaaaattatcaccatcgccatcaccacgcaagtctagcaaatctccaaaa
cgaagatccagtcccaaatcatcatcttcagctagtaagaaagacaagaaagtatctact
gtctcttcaccacttttggagcagcagaggagttctaaaagtaaccagagtaaaaagaaa
ggtcctcgtacccctagccctcctcccccagtacaagaggaaacttccctggggaaaaaa
cacaaagaaaaacataaagcaaaagaacgttcagaagaaaaggcaagggaggtgaaagag
agagggcgtgactttgaaaggcacaaggagaaaaaagagaagcagagggatccgtctgaa
agctcgcgtagacagaaacggtctcctagtcctgcagatcactctggcagtaattcttcc
ccttccagagagtactcaccacctgctgcaaggcgaaggcaaacctcccgagctccagcc
aagtctaccactcacaaacataacttctcaccctctcgaaggtctgcttctccatcaggt
cagcatcattctcccatatcctccagacatcactcctcgtcctcacagtcaggctcctct
gttcaaagacattctccttccccacaccgcaaacgaactccttctccatcctatcaaagg
acagcttccccgcctgtgaggcgctcatcttccccctatcccccacactcttcctctcca
cctcagaggaagcgaagtccttcgcgacaccgatctcctggaagagacaagggaagacac
gatcgggatcggacttcgcagtctcatgacaggcgccacgaaaggcgggacgaaacaaga
ggcaagagagaaaaagaaagagaaacaagggatgatcgtgattatgaccaagagcagagt
acctccagggaccacagggatgacagggagtctcgcgatggaagagatcggagggacacg
agagacaccagagatcggcgggagccacgggattccagagatactcgagactccagagac
acccgggattatggcagggatgccaaagacagtcgtgaccagagggactcacgctccaca
cgggactcgcatgactacagggacagagagagtcgtgatgcccataaaaaggatgaccag
tatcaagacgacttacgcagctatggaagatcccatggcagagaggagagctctcgggct
gaaacaaggaatgactccagaagtgactctagaaatgagagcagaagtgatagaactggc
agaagtcgaggcagaggtccagaattatctgacaaagggagtcggggaactagaggatcc
caggttgacagtcacagcagtagtgggaactaccacgacagctgggaatcaaggagtagc
tacactgatcgggatcgctatgacagtcgggatcaagcaagggattcctcctttgaaaga
agacatggtgaacgggataggcgtgacaacagagaaagagatcagagagcaagctcaccg
gcacgacaccaaggacggagtgatgatctcgaccgggatgagaggagagaggagcgaagg
gtggatcggtctgatgacaggagagatgaaagggcccgggagagagagcgggaaagggag
agggaccgagagagggaaagagaaagagaccgggaaagagagagggagaaagaaagagag
ttggaacgagatcgtgctcgggagcgggagagggacagagagcgggacaaagaaagagac
cgtgaacgggaccgagacagagaccacgacagggaaagggaacgagagagggagagggag
aaggagcgggagcgagagagagagcgggaggaacgagaaagggagcgagaacgagagaga
gatcgagagcgggagcgcgaaagggagagaggtcgagacagagacaaagaaagagaccgc
cagagagactgggatgacaaagaaaaaggaagggaagaccgcagagataagagagaagat
attcgagaagaaagaggctcaagagatgttcatgaggaaagaaaatccaagaagcgtcac
agaaacgaaagcagtccaagtccccgtcagtcacccaaacgtcgccgtgatcattcccct
gatagtgatgcttacaacagtggagatgataaaaatgaaaagcacagactcctgagccag
gttgtgcggccgcaagaatcccggtcactgagcccctctcacgtcacggaggagcggcag
agccgctggaaagatgaagagcgaaaatcggacagaaaggaaagttcccggcgctatgaa
gaaccagagtttaaagagagggtttcttcagcagataagcaaagagagcaaccagatgct
tcagaaggttcccggtccagggttaaggaaaatcttggaaaccgtccttctgaagaaaga
gatgcttctgatagaatgcttgatgacaacaagaagaagtctaagatacagaaaaaggcc
acgaagaagaagaaagatgatgacagtggggtggaaaggtatgctaatgaaccagcacct
gaggaaagccaggtcttttctcctaaaaaaggtcaaaaaaggaaaaatgtggagaaaaag
cggaagagatccaagggtgattctgaagtttctgatgaagaaattgttccacatcataaa
aagaaaaagggcccaagaacccctcctgtaaataaagaagaattggttgaagcaccacct
gagaaagcagtggcagaagtccccacaaaaagagaagatacaacatttagtgactggtca
gatgaagatgttcctgaacgtggtgacattgttgttccagaaagaaccactgaggattcc
catagaaaaagtcacaggacaaggggagaaaaggtggaagcccctcatgttactatagag
gatggaccacaccgtaagcctgtggaccagaagcgcagcagcagcctcggcagcaatcgg
agccatgcctccagcaggcttagatccccctccaatgagtcagcgcatcgcagcggagac
gatcagactggacggaagaggatcctgcacagtagctctagggacagggacagggatagg
gacagggacagggagagggagaagaaaagcttagaaatcactgaaaggaagtcccgaatt
gatcagctgaaacgaggggaacccagtcgcagcacatcttcagatcgtcaagattcaaga
agccacagttccagaagaagttcccctgagtcggatcgtcaggttcattccagatctggg
tcctttgatagcagggaaaggcttcaggagcgagatcgacatgaacacgatcgagagcga
gagagagacaggagagaggggagacagagagactgggaccgagatgtggacaaagactgg
ccgaggagccgggagcgagagagactcagggagcgggagagggagagggagaaaagacgg
gagctggagagagagagagaccgacagctgcctgatactgctgaaagagagagagagaga
actcttgacatctcctctcaaaaggaatcaacaaagcacagtgaaacaaaattggacaga
gatcacgataaggagtttgatggtatttgccgggactcagcggcttcagagaaggaaaaa
acagacaaagatttaggatctttacaaggctttgaagatggaaacgaggctgaaaaagta
gagagtgtagaaggaggagaggatgaaacaaagactaatgatgtgcagtccctggggtct
ggtgctggagaatatgagccaatcagtgatgatgaactggatgaaattctggcaggtgat
gctgaaaagcgtgaggatcaacaagaggatgagaagatgcctggtaaaaatccagtggat
gttatagatgtagactggtccagtcttatgccaaagcagccaaaagaaccacgtgagcct
ggcgctgcactcttaaaattcacaccaggtgctgttatgttgagagttggcatttccaag
cgattggcaggaccagagctcttcaccaaaataaaagagacatgccagagagtgttagaa
aaacctaaagatgcagaaaacctttttgaacacgaactgggagcactgaacatggctgca
cttcggcgaaaagaagagagagcaggtcttctgagcaatctgggcccttgctgcaaagca
ctgtgcttccgcagggattctgcaattcgtaagcagctcatgaagaatgaaaagggtgca
acaaaacaaacttacacaaattccgcagcaatggacagcgacttgttacggttgagtcta
cggttattcaaacgaaagactgtgtgccaagttcctgggcaggaaaagacagaggacagc
aaaattccacagccagctctccagcaggaagtgtgtgtgacttga
DBGET
integrated database retrieval system
